Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Smc4Q8CG47 Gm44616-201ENSMUST00000206417 1732 ntBASIC18.54■□□□□ 0.56
Smc4Q8CG47 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smc4Q8CG47 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Smc4Q8CG47 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smc4Q8CG47 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC18.54■□□□□ 0.56
Smc4Q8CG47 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smc4Q8CG47 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Smc4Q8CG47 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc4Q8CG47 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
Smc4Q8CG47 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc4Q8CG47 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Smc4Q8CG47 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC18.53■□□□□ 0.56
Smc4Q8CG47 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc4Q8CG47 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Smc4Q8CG47 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC18.53■□□□□ 0.56
Smc4Q8CG47 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc4Q8CG47 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC18.53■□□□□ 0.56
Smc4Q8CG47 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Smc4Q8CG47 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Smc4Q8CG47 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc4Q8CG47 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc4Q8CG47 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC18.53■□□□□ 0.56
Smc4Q8CG47 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Smc4Q8CG47 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smc4Q8CG47 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smc4Q8CG47 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Smc4Q8CG47 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smc4Q8CG47 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smc4Q8CG47 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smc4Q8CG47 Gm6973-201ENSMUST00000117080 721 ntBASIC18.52■□□□□ 0.56
Smc4Q8CG47 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC18.52■□□□□ 0.56
Smc4Q8CG47 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC18.52■□□□□ 0.56
Smc4Q8CG47 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Smc4Q8CG47 Gm43125-201ENSMUST00000201724 730 ntBASIC18.52■□□□□ 0.56
Smc4Q8CG47 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Smc4Q8CG47 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smc4Q8CG47 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smc4Q8CG47 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smc4Q8CG47 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Smc4Q8CG47 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC18.52■□□□□ 0.55
Smc4Q8CG47 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Smc4Q8CG47 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Smc4Q8CG47 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Smc4Q8CG47 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc4Q8CG47 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc4Q8CG47 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc4Q8CG47 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc4Q8CG47 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc4Q8CG47 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc4Q8CG47 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc4Q8CG47 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc4Q8CG47 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc4Q8CG47 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc4Q8CG47 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC18.51■□□□□ 0.55
Smc4Q8CG47 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC18.51■□□□□ 0.55
Smc4Q8CG47 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC18.51■□□□□ 0.55
Smc4Q8CG47 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC18.51■□□□□ 0.55
Smc4Q8CG47 Gm43474-201ENSMUST00000196415 774 ntBASIC18.51■□□□□ 0.55
Smc4Q8CG47 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC18.51■□□□□ 0.55
Smc4Q8CG47 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Smc4Q8CG47 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Smc4Q8CG47 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Smc4Q8CG47 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc4Q8CG47 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc4Q8CG47 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc4Q8CG47 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc4Q8CG47 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc4Q8CG47 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Smc4Q8CG47 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Smc4Q8CG47 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Smc4Q8CG47 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc4Q8CG47 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smc4Q8CG47 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Smc4Q8CG47 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Smc4Q8CG47 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Smc4Q8CG47 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smc4Q8CG47 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smc4Q8CG47 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
Smc4Q8CG47 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smc4Q8CG47 AC131743.5-201ENSMUST00000220775 1618 ntBASIC18.5■□□□□ 0.55
Smc4Q8CG47 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smc4Q8CG47 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smc4Q8CG47 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC18.5■□□□□ 0.55
Smc4Q8CG47 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC18.5■□□□□ 0.55
Smc4Q8CG47 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Smc4Q8CG47 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC18.5■□□□□ 0.55
Smc4Q8CG47 Gm8597-201ENSMUST00000191525 1109 ntBASIC18.5■□□□□ 0.55
Smc4Q8CG47 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smc4Q8CG47 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC18.5■□□□□ 0.55
Smc4Q8CG47 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC18.5■□□□□ 0.55
Smc4Q8CG47 AC140397.2-201ENSMUST00000224213 834 ntBASIC18.5■□□□□ 0.55
Smc4Q8CG47 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Smc4Q8CG47 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smc4Q8CG47 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smc4Q8CG47 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smc4Q8CG47 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Smc4Q8CG47 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smc4Q8CG47 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smc4Q8CG47 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms