Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smg1Q8BKX6 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Smg1Q8BKX6 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smg1Q8BKX6 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smg1Q8BKX6 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smg1Q8BKX6 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smg1Q8BKX6 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.59□□□□□ -0.39
Smg1Q8BKX6 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.59□□□□□ -0.39
Smg1Q8BKX6 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smg1Q8BKX6 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smg1Q8BKX6 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smg1Q8BKX6 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smg1Q8BKX6 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smg1Q8BKX6 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Smg1Q8BKX6 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Smg1Q8BKX6 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smg1Q8BKX6 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Smg1Q8BKX6 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smg1Q8BKX6 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Smg1Q8BKX6 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.59□□□□□ -0.39
Smg1Q8BKX6 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smg1Q8BKX6 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smg1Q8BKX6 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.59□□□□□ -0.39
Smg1Q8BKX6 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smg1Q8BKX6 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC12.59□□□□□ -0.39
Smg1Q8BKX6 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.59□□□□□ -0.39
Smg1Q8BKX6 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smg1Q8BKX6 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smg1Q8BKX6 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Smg1Q8BKX6 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smg1Q8BKX6 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smg1Q8BKX6 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smg1Q8BKX6 Gm3436-201ENSMUST00000179930 840 ntBASIC12.59□□□□□ -0.39
Smg1Q8BKX6 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Smg1Q8BKX6 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Smg1Q8BKX6 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smg1Q8BKX6 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Smg1Q8BKX6 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Smg1Q8BKX6 Snora78-201ENSMUST00000158630 128 ntBASIC12.58□□□□□ -0.4
Smg1Q8BKX6 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC12.58□□□□□ -0.4
Smg1Q8BKX6 AC153526.5-201ENSMUST00000218661 2147 ntBASIC12.58□□□□□ -0.4
Smg1Q8BKX6 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smg1Q8BKX6 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smg1Q8BKX6 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smg1Q8BKX6 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smg1Q8BKX6 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smg1Q8BKX6 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smg1Q8BKX6 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smg1Q8BKX6 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Smg1Q8BKX6 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.58□□□□□ -0.4
Smg1Q8BKX6 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Smg1Q8BKX6 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Smg1Q8BKX6 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smg1Q8BKX6 Gm15823-201ENSMUST00000064305 670 ntBASIC12.58□□□□□ -0.4
Smg1Q8BKX6 AC115863.1-201ENSMUST00000214815 1813 ntBASIC12.58□□□□□ -0.4
Smg1Q8BKX6 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smg1Q8BKX6 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.58□□□□□ -0.4
Smg1Q8BKX6 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smg1Q8BKX6 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smg1Q8BKX6 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Smg1Q8BKX6 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smg1Q8BKX6 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smg1Q8BKX6 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Smg1Q8BKX6 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smg1Q8BKX6 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.58□□□□□ -0.4
Smg1Q8BKX6 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.58□□□□□ -0.4
Smg1Q8BKX6 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smg1Q8BKX6 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Smg1Q8BKX6 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Smg1Q8BKX6 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Smg1Q8BKX6 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smg1Q8BKX6 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smg1Q8BKX6 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smg1Q8BKX6 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smg1Q8BKX6 Dancr-204ENSMUST00000132389 2347 ntBASIC12.57□□□□□ -0.4
Smg1Q8BKX6 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Smg1Q8BKX6 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smg1Q8BKX6 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smg1Q8BKX6 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smg1Q8BKX6 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.57□□□□□ -0.4
Smg1Q8BKX6 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Smg1Q8BKX6 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Smg1Q8BKX6 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smg1Q8BKX6 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smg1Q8BKX6 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.57□□□□□ -0.4
Smg1Q8BKX6 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smg1Q8BKX6 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Smg1Q8BKX6 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.57□□□□□ -0.4
Smg1Q8BKX6 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smg1Q8BKX6 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Smg1Q8BKX6 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Smg1Q8BKX6 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smg1Q8BKX6 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Smg1Q8BKX6 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smg1Q8BKX6 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smg1Q8BKX6 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Smg1Q8BKX6 Gm45244-201ENSMUST00000211328 2200 ntBASIC12.57□□□□□ -0.4
Smg1Q8BKX6 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.57□□□□□ -0.4
Smg1Q8BKX6 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Smg1Q8BKX6 Mir7070-201ENSMUST00000183657 86 ntBASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms