Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Upk3bQ80YF6 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.76□□□□□ -0.37
Upk3bQ80YF6 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Upk3bQ80YF6 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk3bQ80YF6 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk3bQ80YF6 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk3bQ80YF6 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Upk3bQ80YF6 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Upk3bQ80YF6 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk3bQ80YF6 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Upk3bQ80YF6 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk3bQ80YF6 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk3bQ80YF6 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk3bQ80YF6 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk3bQ80YF6 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Upk3bQ80YF6 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Upk3bQ80YF6 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk3bQ80YF6 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk3bQ80YF6 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk3bQ80YF6 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk3bQ80YF6 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Upk3bQ80YF6 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk3bQ80YF6 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk3bQ80YF6 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk3bQ80YF6 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk3bQ80YF6 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk3bQ80YF6 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk3bQ80YF6 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk3bQ80YF6 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk3bQ80YF6 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.75□□□□□ -0.37
Upk3bQ80YF6 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk3bQ80YF6 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk3bQ80YF6 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk3bQ80YF6 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Upk3bQ80YF6 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk3bQ80YF6 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Upk3bQ80YF6 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Upk3bQ80YF6 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk3bQ80YF6 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk3bQ80YF6 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC12.75□□□□□ -0.37
Upk3bQ80YF6 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Upk3bQ80YF6 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC12.75□□□□□ -0.37
Upk3bQ80YF6 Gm12497-201ENSMUST00000138778 237 ntBASIC12.75□□□□□ -0.37
Upk3bQ80YF6 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk3bQ80YF6 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Upk3bQ80YF6 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.75□□□□□ -0.37
Upk3bQ80YF6 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Upk3bQ80YF6 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Upk3bQ80YF6 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.75□□□□□ -0.37
Upk3bQ80YF6 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.75□□□□□ -0.37
Upk3bQ80YF6 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk3bQ80YF6 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Upk3bQ80YF6 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk3bQ80YF6 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk3bQ80YF6 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk3bQ80YF6 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk3bQ80YF6 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Upk3bQ80YF6 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk3bQ80YF6 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.75□□□□□ -0.37
Upk3bQ80YF6 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk3bQ80YF6 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk3bQ80YF6 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk3bQ80YF6 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk3bQ80YF6 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk3bQ80YF6 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk3bQ80YF6 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Upk3bQ80YF6 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk3bQ80YF6 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.74□□□□□ -0.37
Upk3bQ80YF6 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk3bQ80YF6 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.74□□□□□ -0.37
Upk3bQ80YF6 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk3bQ80YF6 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Upk3bQ80YF6 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Upk3bQ80YF6 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk3bQ80YF6 Celf4-206ENSMUST00000224553 1729 ntBASIC12.74□□□□□ -0.37
Upk3bQ80YF6 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Upk3bQ80YF6 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Upk3bQ80YF6 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.74□□□□□ -0.37
Upk3bQ80YF6 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk3bQ80YF6 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk3bQ80YF6 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk3bQ80YF6 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk3bQ80YF6 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk3bQ80YF6 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Upk3bQ80YF6 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Upk3bQ80YF6 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk3bQ80YF6 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.74□□□□□ -0.37
Upk3bQ80YF6 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk3bQ80YF6 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Upk3bQ80YF6 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.74□□□□□ -0.37
Upk3bQ80YF6 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Upk3bQ80YF6 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Upk3bQ80YF6 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk3bQ80YF6 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Upk3bQ80YF6 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk3bQ80YF6 Gm25745-201ENSMUST00000174945 133 ntBASIC12.74□□□□□ -0.37
Upk3bQ80YF6 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC12.74□□□□□ -0.37
Upk3bQ80YF6 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk3bQ80YF6 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk3bQ80YF6 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms