Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.4■□□□□ 0.38
Prpf40bQ80W14 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf40bQ80W14 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC17.4■□□□□ 0.38
Prpf40bQ80W14 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf40bQ80W14 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf40bQ80W14 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Prpf40bQ80W14 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf40bQ80W14 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf40bQ80W14 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf40bQ80W14 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Prpf40bQ80W14 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Prpf40bQ80W14 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.4■□□□□ 0.38
Prpf40bQ80W14 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prpf40bQ80W14 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prpf40bQ80W14 CT025626.1-201ENSMUST00000223735 1455 ntBASIC17.39■□□□□ 0.37
Prpf40bQ80W14 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prpf40bQ80W14 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prpf40bQ80W14 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prpf40bQ80W14 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC17.39■□□□□ 0.37
Prpf40bQ80W14 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC17.39■□□□□ 0.37
Prpf40bQ80W14 Thap2-203ENSMUST00000218989 527 ntBASIC17.39■□□□□ 0.37
Prpf40bQ80W14 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Prpf40bQ80W14 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prpf40bQ80W14 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prpf40bQ80W14 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Prpf40bQ80W14 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prpf40bQ80W14 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Prpf40bQ80W14 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf40bQ80W14 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf40bQ80W14 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf40bQ80W14 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf40bQ80W14 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf40bQ80W14 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf40bQ80W14 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Prpf40bQ80W14 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Prpf40bQ80W14 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Prpf40bQ80W14 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.38■□□□□ 0.37
Prpf40bQ80W14 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf40bQ80W14 Gm10253-201ENSMUST00000194270 940 ntBASIC17.38■□□□□ 0.37
Prpf40bQ80W14 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf40bQ80W14 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf40bQ80W14 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Prpf40bQ80W14 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf40bQ80W14 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf40bQ80W14 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf40bQ80W14 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf40bQ80W14 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prpf40bQ80W14 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prpf40bQ80W14 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.37■□□□□ 0.37
Prpf40bQ80W14 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prpf40bQ80W14 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prpf40bQ80W14 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Prpf40bQ80W14 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prpf40bQ80W14 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
Prpf40bQ80W14 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prpf40bQ80W14 Gm12151-201ENSMUST00000121374 290 ntBASIC17.37■□□□□ 0.37
Prpf40bQ80W14 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC17.37■□□□□ 0.37
Prpf40bQ80W14 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC17.37■□□□□ 0.37
Prpf40bQ80W14 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.37■□□□□ 0.37
Prpf40bQ80W14 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
Prpf40bQ80W14 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prpf40bQ80W14 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Prpf40bQ80W14 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prpf40bQ80W14 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Prpf40bQ80W14 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Prpf40bQ80W14 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prpf40bQ80W14 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Prpf40bQ80W14 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Prpf40bQ80W14 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Prpf40bQ80W14 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prpf40bQ80W14 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prpf40bQ80W14 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Prpf40bQ80W14 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf40bQ80W14 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Prpf40bQ80W14 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf40bQ80W14 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf40bQ80W14 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf40bQ80W14 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf40bQ80W14 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
Prpf40bQ80W14 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf40bQ80W14 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf40bQ80W14 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf40bQ80W14 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf40bQ80W14 AC126250.1-201ENSMUST00000228343 1768 ntBASIC17.36■□□□□ 0.37
Prpf40bQ80W14 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.36■□□□□ 0.37
Prpf40bQ80W14 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf40bQ80W14 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.36■□□□□ 0.37
Prpf40bQ80W14 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf40bQ80W14 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf40bQ80W14 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Prpf40bQ80W14 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC17.36■□□□□ 0.37
Prpf40bQ80W14 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC17.36■□□□□ 0.37
Prpf40bQ80W14 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC17.36■□□□□ 0.37
Prpf40bQ80W14 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC17.36■□□□□ 0.37
Prpf40bQ80W14 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf40bQ80W14 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC17.36■□□□□ 0.37
Prpf40bQ80W14 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf40bQ80W14 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf40bQ80W14 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Prpf40bQ80W14 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms