Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox17Q61473 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox17Q61473 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox17Q61473 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox17Q61473 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox17Q61473 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sox17Q61473 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox17Q61473 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Sox17Q61473 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox17Q61473 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox17Q61473 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox17Q61473 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox17Q61473 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox17Q61473 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sox17Q61473 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox17Q61473 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sox17Q61473 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox17Q61473 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sox17Q61473 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sox17Q61473 Gm23547-201ENSMUST00000158210 271 ntBASIC14.16□□□□□ -0.14
Sox17Q61473 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox17Q61473 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Sox17Q61473 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.16□□□□□ -0.14
Sox17Q61473 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Sox17Q61473 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox17Q61473 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Sox17Q61473 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox17Q61473 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox17Q61473 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox17Q61473 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Sox17Q61473 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox17Q61473 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox17Q61473 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox17Q61473 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox17Q61473 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox17Q61473 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox17Q61473 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sox17Q61473 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox17Q61473 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox17Q61473 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox17Q61473 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox17Q61473 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Sox17Q61473 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.15□□□□□ -0.14
Sox17Q61473 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Sox17Q61473 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox17Q61473 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox17Q61473 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox17Q61473 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox17Q61473 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox17Q61473 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox17Q61473 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox17Q61473 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox17Q61473 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sox17Q61473 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox17Q61473 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox17Q61473 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox17Q61473 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox17Q61473 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox17Q61473 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.15□□□□□ -0.14
Sox17Q61473 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.15□□□□□ -0.14
Sox17Q61473 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox17Q61473 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.15□□□□□ -0.14
Sox17Q61473 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.15□□□□□ -0.14
Sox17Q61473 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sox17Q61473 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sox17Q61473 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox17Q61473 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox17Q61473 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox17Q61473 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox17Q61473 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox17Q61473 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox17Q61473 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox17Q61473 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sox17Q61473 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Sox17Q61473 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox17Q61473 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox17Q61473 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sox17Q61473 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox17Q61473 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox17Q61473 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Sox17Q61473 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox17Q61473 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Sox17Q61473 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.15
Sox17Q61473 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Sox17Q61473 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Sox17Q61473 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox17Q61473 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox17Q61473 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox17Q61473 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox17Q61473 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox17Q61473 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Sox17Q61473 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sox17Q61473 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox17Q61473 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox17Q61473 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox17Q61473 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox17Q61473 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sox17Q61473 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Sox17Q61473 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Sox17Q61473 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms