Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Shroom1Q5SX79 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Shroom1Q5SX79 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Shroom1Q5SX79 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shroom1Q5SX79 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Shroom1Q5SX79 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.04■□□□□ 0.16
Shroom1Q5SX79 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shroom1Q5SX79 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shroom1Q5SX79 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shroom1Q5SX79 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Shroom1Q5SX79 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Shroom1Q5SX79 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Shroom1Q5SX79 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.04■□□□□ 0.16
Shroom1Q5SX79 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Shroom1Q5SX79 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Shroom1Q5SX79 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shroom1Q5SX79 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Shroom1Q5SX79 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shroom1Q5SX79 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shroom1Q5SX79 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shroom1Q5SX79 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.03■□□□□ 0.16
Shroom1Q5SX79 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shroom1Q5SX79 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shroom1Q5SX79 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Shroom1Q5SX79 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shroom1Q5SX79 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shroom1Q5SX79 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shroom1Q5SX79 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC16.03■□□□□ 0.16
Shroom1Q5SX79 Mir6990-201ENSMUST00000183724 91 ntBASIC16.03■□□□□ 0.16
Shroom1Q5SX79 Gm44335-201ENSMUST00000196879 141 ntBASIC16.03■□□□□ 0.16
Shroom1Q5SX79 Gm44297-201ENSMUST00000198304 141 ntBASIC16.03■□□□□ 0.16
Shroom1Q5SX79 Gm44346-201ENSMUST00000198851 141 ntBASIC16.03■□□□□ 0.16
Shroom1Q5SX79 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC16.03■□□□□ 0.16
Shroom1Q5SX79 AC159114.1-201ENSMUST00000220349 266 ntBASIC16.03■□□□□ 0.16
Shroom1Q5SX79 Gpr146-202ENSMUST00000053120 1040 ntBASIC16.03■□□□□ 0.16
Shroom1Q5SX79 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shroom1Q5SX79 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Shroom1Q5SX79 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shroom1Q5SX79 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shroom1Q5SX79 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shroom1Q5SX79 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Shroom1Q5SX79 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
Shroom1Q5SX79 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Shroom1Q5SX79 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shroom1Q5SX79 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Shroom1Q5SX79 Gm13410-201ENSMUST00000117058 1415 ntBASIC16.02■□□□□ 0.16
Shroom1Q5SX79 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Shroom1Q5SX79 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Shroom1Q5SX79 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Shroom1Q5SX79 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Shroom1Q5SX79 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Shroom1Q5SX79 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.02■□□□□ 0.16
Shroom1Q5SX79 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Shroom1Q5SX79 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.02■□□□□ 0.16
Shroom1Q5SX79 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Shroom1Q5SX79 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Shroom1Q5SX79 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.02■□□□□ 0.16
Shroom1Q5SX79 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
Shroom1Q5SX79 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC16.02■□□□□ 0.16
Shroom1Q5SX79 Gm16198-201ENSMUST00000118766 670 ntBASIC16.02■□□□□ 0.16
Shroom1Q5SX79 Gm13616-201ENSMUST00000120600 222 ntBASIC16.02■□□□□ 0.16
Shroom1Q5SX79 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Shroom1Q5SX79 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC16.02■□□□□ 0.16
Shroom1Q5SX79 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Shroom1Q5SX79 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC16.02■□□□□ 0.16
Shroom1Q5SX79 Mir6956-201ENSMUST00000183598 62 ntBASIC16.02■□□□□ 0.16
Shroom1Q5SX79 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Shroom1Q5SX79 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Shroom1Q5SX79 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Shroom1Q5SX79 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Shroom1Q5SX79 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Shroom1Q5SX79 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.02■□□□□ 0.15
Shroom1Q5SX79 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Shroom1Q5SX79 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Shroom1Q5SX79 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Shroom1Q5SX79 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Shroom1Q5SX79 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Shroom1Q5SX79 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Shroom1Q5SX79 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Shroom1Q5SX79 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
Shroom1Q5SX79 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shroom1Q5SX79 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Shroom1Q5SX79 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Shroom1Q5SX79 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.01■□□□□ 0.15
Shroom1Q5SX79 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shroom1Q5SX79 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shroom1Q5SX79 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shroom1Q5SX79 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC16.01■□□□□ 0.15
Shroom1Q5SX79 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shroom1Q5SX79 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.01■□□□□ 0.15
Shroom1Q5SX79 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shroom1Q5SX79 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Shroom1Q5SX79 Gm18889-201ENSMUST00000174284 929 ntBASIC16.01■□□□□ 0.15
Shroom1Q5SX79 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Shroom1Q5SX79 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC16.01■□□□□ 0.15
Shroom1Q5SX79 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shroom1Q5SX79 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shroom1Q5SX79 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
Shroom1Q5SX79 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shroom1Q5SX79 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms