Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1aP97445 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Cacna1aP97445 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1aP97445 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1aP97445 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1aP97445 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Cacna1aP97445 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1aP97445 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1aP97445 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.89□□□□□ -0.19
Cacna1aP97445 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1aP97445 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.89□□□□□ -0.19
Cacna1aP97445 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1aP97445 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Cacna1aP97445 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1aP97445 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1aP97445 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1aP97445 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1aP97445 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Cacna1aP97445 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1aP97445 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1aP97445 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1aP97445 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1aP97445 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1aP97445 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1aP97445 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1aP97445 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Cacna1aP97445 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1aP97445 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1aP97445 Gm10499-201ENSMUST00000174094 934 ntBASIC13.89□□□□□ -0.19
Cacna1aP97445 Gm18827-201ENSMUST00000188341 790 ntBASIC13.89□□□□□ -0.19
Cacna1aP97445 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.89□□□□□ -0.19
Cacna1aP97445 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Cacna1aP97445 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1aP97445 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1aP97445 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1aP97445 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1aP97445 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cacna1aP97445 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cacna1aP97445 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cacna1aP97445 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cacna1aP97445 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cacna1aP97445 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Cacna1aP97445 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cacna1aP97445 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cacna1aP97445 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cacna1aP97445 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cacna1aP97445 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.88□□□□□ -0.19
Cacna1aP97445 Gm15635-204ENSMUST00000208024 2539 ntBASIC13.88□□□□□ -0.19
Cacna1aP97445 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cacna1aP97445 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.88□□□□□ -0.19
Cacna1aP97445 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.88□□□□□ -0.19
Cacna1aP97445 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cacna1aP97445 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cacna1aP97445 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cacna1aP97445 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cacna1aP97445 Gm22189-201ENSMUST00000103822 86 ntBASIC13.88□□□□□ -0.19
Cacna1aP97445 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.88□□□□□ -0.19
Cacna1aP97445 Gm27533-201ENSMUST00000183800 152 ntBASIC13.88□□□□□ -0.19
Cacna1aP97445 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.88□□□□□ -0.19
Cacna1aP97445 Gm43703-201ENSMUST00000200523 763 ntBASIC13.88□□□□□ -0.19
Cacna1aP97445 Gm9063-201ENSMUST00000223299 582 ntBASIC13.88□□□□□ -0.19
Cacna1aP97445 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cacna1aP97445 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cacna1aP97445 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cacna1aP97445 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cacna1aP97445 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cacna1aP97445 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cacna1aP97445 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cacna1aP97445 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cacna1aP97445 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cacna1aP97445 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Cacna1aP97445 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cacna1aP97445 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.87□□□□□ -0.19
Cacna1aP97445 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cacna1aP97445 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cacna1aP97445 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
Cacna1aP97445 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cacna1aP97445 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cacna1aP97445 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cacna1aP97445 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cacna1aP97445 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cacna1aP97445 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cacna1aP97445 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cacna1aP97445 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Cacna1aP97445 Gm14767-201ENSMUST00000121559 586 ntBASIC13.87□□□□□ -0.19
Cacna1aP97445 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.87□□□□□ -0.19
Cacna1aP97445 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cacna1aP97445 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cacna1aP97445 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.87□□□□□ -0.19
Cacna1aP97445 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cacna1aP97445 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cacna1aP97445 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cacna1aP97445 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cacna1aP97445 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.87□□□□□ -0.19
Cacna1aP97445 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cacna1aP97445 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cacna1aP97445 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cacna1aP97445 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cacna1aP97445 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Cacna1aP97445 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms