Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SgcdP82347 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.03□□□□□ -0.16
SgcdP82347 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
SgcdP82347 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
SgcdP82347 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SgcdP82347 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
SgcdP82347 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SgcdP82347 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.03□□□□□ -0.16
SgcdP82347 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.03□□□□□ -0.16
SgcdP82347 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SgcdP82347 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SgcdP82347 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SgcdP82347 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SgcdP82347 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SgcdP82347 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SgcdP82347 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SgcdP82347 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SgcdP82347 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
SgcdP82347 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SgcdP82347 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SgcdP82347 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SgcdP82347 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SgcdP82347 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
SgcdP82347 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SgcdP82347 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.02□□□□□ -0.16
SgcdP82347 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SgcdP82347 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.02□□□□□ -0.16
SgcdP82347 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SgcdP82347 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.02□□□□□ -0.16
SgcdP82347 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
SgcdP82347 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SgcdP82347 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SgcdP82347 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SgcdP82347 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
SgcdP82347 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SgcdP82347 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SgcdP82347 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SgcdP82347 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.02□□□□□ -0.17
SgcdP82347 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SgcdP82347 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
SgcdP82347 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
SgcdP82347 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
SgcdP82347 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SgcdP82347 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.01□□□□□ -0.17
SgcdP82347 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
SgcdP82347 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SgcdP82347 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SgcdP82347 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.01□□□□□ -0.17
SgcdP82347 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SgcdP82347 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SgcdP82347 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SgcdP82347 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SgcdP82347 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SgcdP82347 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SgcdP82347 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SgcdP82347 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SgcdP82347 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SgcdP82347 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SgcdP82347 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
SgcdP82347 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SgcdP82347 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.01□□□□□ -0.17
SgcdP82347 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SgcdP82347 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SgcdP82347 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SgcdP82347 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SgcdP82347 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SgcdP82347 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14□□□□□ -0.17
SgcdP82347 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SgcdP82347 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14□□□□□ -0.17
SgcdP82347 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
SgcdP82347 Gm12134-201ENSMUST00000122109 520 ntBASIC14□□□□□ -0.17
SgcdP82347 Gm11860-201ENSMUST00000122346 1010 ntBASIC14□□□□□ -0.17
SgcdP82347 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SgcdP82347 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
SgcdP82347 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14□□□□□ -0.17
SgcdP82347 Gm37722-201ENSMUST00000193757 208 ntBASIC14□□□□□ -0.17
SgcdP82347 Gm5864-201ENSMUST00000202263 970 ntBASIC14□□□□□ -0.17
SgcdP82347 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SgcdP82347 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SgcdP82347 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
SgcdP82347 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14□□□□□ -0.17
SgcdP82347 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14□□□□□ -0.17
SgcdP82347 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SgcdP82347 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14□□□□□ -0.17
SgcdP82347 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14□□□□□ -0.17
SgcdP82347 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SgcdP82347 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14□□□□□ -0.17
SgcdP82347 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14□□□□□ -0.17
SgcdP82347 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SgcdP82347 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
SgcdP82347 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SgcdP82347 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SgcdP82347 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SgcdP82347 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SgcdP82347 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
SgcdP82347 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SgcdP82347 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SgcdP82347 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SgcdP82347 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SgcdP82347 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms