Protein–RNA interactions for Protein: P20615

Hoxb9, Homeobox protein Hox-B9, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb9P20615 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxb9P20615 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxb9P20615 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxb9P20615 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxb9P20615 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Hoxb9P20615 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxb9P20615 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxb9P20615 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxb9P20615 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxb9P20615 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxb9P20615 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Hoxb9P20615 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Hoxb9P20615 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Hoxb9P20615 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxb9P20615 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Hoxb9P20615 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxb9P20615 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxb9P20615 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.44□□□□□ -0.1
Hoxb9P20615 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxb9P20615 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxb9P20615 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxb9P20615 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxb9P20615 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxb9P20615 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxb9P20615 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Hoxb9P20615 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Hoxb9P20615 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxb9P20615 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.43□□□□□ -0.1
Hoxb9P20615 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxb9P20615 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.43□□□□□ -0.1
Hoxb9P20615 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxb9P20615 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Hoxb9P20615 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Hoxb9P20615 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.43□□□□□ -0.1
Hoxb9P20615 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxb9P20615 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxb9P20615 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxb9P20615 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxb9P20615 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.43□□□□□ -0.1
Hoxb9P20615 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxb9P20615 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxb9P20615 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxb9P20615 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxb9P20615 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxb9P20615 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxb9P20615 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxb9P20615 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxb9P20615 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxb9P20615 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxb9P20615 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxb9P20615 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxb9P20615 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxb9P20615 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxb9P20615 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxb9P20615 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.42□□□□□ -0.1
Hoxb9P20615 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxb9P20615 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.42□□□□□ -0.1
Hoxb9P20615 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.42□□□□□ -0.1
Hoxb9P20615 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.42□□□□□ -0.1
Hoxb9P20615 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxb9P20615 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxb9P20615 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxb9P20615 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxb9P20615 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxb9P20615 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxb9P20615 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.42□□□□□ -0.1
Hoxb9P20615 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Hoxb9P20615 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxb9P20615 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxb9P20615 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxb9P20615 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxb9P20615 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Hoxb9P20615 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxb9P20615 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Hoxb9P20615 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxb9P20615 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxb9P20615 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxb9P20615 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxb9P20615 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxb9P20615 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.41□□□□□ -0.1
Hoxb9P20615 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.41□□□□□ -0.1
Hoxb9P20615 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.41□□□□□ -0.1
Hoxb9P20615 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.41□□□□□ -0.1
Hoxb9P20615 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.41□□□□□ -0.1
Hoxb9P20615 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.41□□□□□ -0.1
Hoxb9P20615 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxb9P20615 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxb9P20615 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Hoxb9P20615 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxb9P20615 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxb9P20615 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Hoxb9P20615 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxb9P20615 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxb9P20615 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxb9P20615 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxb9P20615 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxb9P20615 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxb9P20615 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Hoxb9P20615 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxb9P20615 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms