Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cops4O88544 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cops4O88544 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cops4O88544 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cops4O88544 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cops4O88544 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cops4O88544 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cops4O88544 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cops4O88544 Mir7071-201ENSMUST00000184847 69 ntBASIC13.95□□□□□ -0.18
Cops4O88544 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cops4O88544 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.95□□□□□ -0.18
Cops4O88544 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cops4O88544 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Cops4O88544 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cops4O88544 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cops4O88544 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cops4O88544 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cops4O88544 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Cops4O88544 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cops4O88544 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cops4O88544 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cops4O88544 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
Cops4O88544 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cops4O88544 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cops4O88544 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cops4O88544 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cops4O88544 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cops4O88544 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
Cops4O88544 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cops4O88544 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cops4O88544 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.94□□□□□ -0.18
Cops4O88544 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.94□□□□□ -0.18
Cops4O88544 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cops4O88544 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cops4O88544 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cops4O88544 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
Cops4O88544 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cops4O88544 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cops4O88544 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Cops4O88544 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cops4O88544 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cops4O88544 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cops4O88544 Gm11950-201ENSMUST00000121615 838 ntBASIC13.94□□□□□ -0.18
Cops4O88544 Gm25016-201ENSMUST00000158399 131 ntBASIC13.94□□□□□ -0.18
Cops4O88544 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.94□□□□□ -0.18
Cops4O88544 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
Cops4O88544 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cops4O88544 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.94□□□□□ -0.18
Cops4O88544 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Cops4O88544 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cops4O88544 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cops4O88544 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cops4O88544 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cops4O88544 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
Cops4O88544 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cops4O88544 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cops4O88544 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Cops4O88544 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cops4O88544 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cops4O88544 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cops4O88544 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cops4O88544 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Cops4O88544 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cops4O88544 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cops4O88544 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cops4O88544 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.93□□□□□ -0.18
Cops4O88544 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cops4O88544 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cops4O88544 Gm8258-201ENSMUST00000055593 1449 ntBASIC13.93□□□□□ -0.18
Cops4O88544 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cops4O88544 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cops4O88544 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cops4O88544 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cops4O88544 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cops4O88544 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cops4O88544 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC13.93□□□□□ -0.18
Cops4O88544 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cops4O88544 Gm6345-202ENSMUST00000180900 204 ntBASIC13.93□□□□□ -0.18
Cops4O88544 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cops4O88544 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cops4O88544 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cops4O88544 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cops4O88544 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cops4O88544 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cops4O88544 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cops4O88544 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Cops4O88544 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cops4O88544 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cops4O88544 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cops4O88544 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cops4O88544 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cops4O88544 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cops4O88544 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cops4O88544 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cops4O88544 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cops4O88544 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cops4O88544 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC13.92□□□□□ -0.18
Cops4O88544 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cops4O88544 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cops4O88544 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms