Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.52■□□□□ 0.07
Trove2O08848 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trove2O08848 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trove2O08848 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
Trove2O08848 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC15.51■□□□□ 0.07
Trove2O08848 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trove2O08848 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trove2O08848 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trove2O08848 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trove2O08848 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trove2O08848 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trove2O08848 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.51■□□□□ 0.07
Trove2O08848 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trove2O08848 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trove2O08848 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trove2O08848 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trove2O08848 Gm15794-201ENSMUST00000120182 631 ntBASIC15.51■□□□□ 0.07
Trove2O08848 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.51■□□□□ 0.07
Trove2O08848 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.51■□□□□ 0.07
Trove2O08848 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
Trove2O08848 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trove2O08848 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trove2O08848 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Trove2O08848 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trove2O08848 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.51■□□□□ 0.07
Trove2O08848 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Trove2O08848 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trove2O08848 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trove2O08848 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trove2O08848 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trove2O08848 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.51■□□□□ 0.07
Trove2O08848 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.51■□□□□ 0.07
Trove2O08848 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trove2O08848 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trove2O08848 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trove2O08848 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trove2O08848 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Trove2O08848 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Trove2O08848 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Trove2O08848 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trove2O08848 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trove2O08848 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trove2O08848 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trove2O08848 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trove2O08848 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trove2O08848 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trove2O08848 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trove2O08848 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trove2O08848 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trove2O08848 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trove2O08848 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trove2O08848 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trove2O08848 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trove2O08848 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trove2O08848 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC15.5■□□□□ 0.07
Trove2O08848 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trove2O08848 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trove2O08848 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trove2O08848 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Trove2O08848 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trove2O08848 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trove2O08848 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trove2O08848 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trove2O08848 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trove2O08848 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.49■□□□□ 0.07
Trove2O08848 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trove2O08848 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.49■□□□□ 0.07
Trove2O08848 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trove2O08848 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.49■□□□□ 0.07
Trove2O08848 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.49■□□□□ 0.07
Trove2O08848 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.49■□□□□ 0.07
Trove2O08848 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Trove2O08848 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trove2O08848 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.49■□□□□ 0.07
Trove2O08848 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trove2O08848 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trove2O08848 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trove2O08848 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trove2O08848 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trove2O08848 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trove2O08848 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trove2O08848 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trove2O08848 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.49■□□□□ 0.07
Trove2O08848 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trove2O08848 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trove2O08848 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trove2O08848 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Trove2O08848 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trove2O08848 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Trove2O08848 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trove2O08848 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trove2O08848 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trove2O08848 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trove2O08848 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trove2O08848 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trove2O08848 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
Trove2O08848 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trove2O08848 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trove2O08848 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trove2O08848 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms