Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Ercc2O08811 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ercc2O08811 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ercc2O08811 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ercc2O08811 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ercc2O08811 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Ercc2O08811 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ercc2O08811 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ercc2O08811 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ercc2O08811 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ercc2O08811 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ercc2O08811 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ercc2O08811 Gm13597-201ENSMUST00000121239 375 ntBASIC15.43■□□□□ 0.06
Ercc2O08811 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ercc2O08811 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.43■□□□□ 0.06
Ercc2O08811 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ercc2O08811 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ercc2O08811 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.43■□□□□ 0.06
Ercc2O08811 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ercc2O08811 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ercc2O08811 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
Ercc2O08811 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ercc2O08811 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
Ercc2O08811 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ercc2O08811 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ercc2O08811 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.43■□□□□ 0.06
Ercc2O08811 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ercc2O08811 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ercc2O08811 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
Ercc2O08811 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.43■□□□□ 0.06
Ercc2O08811 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ercc2O08811 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Ercc2O08811 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ercc2O08811 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ercc2O08811 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ercc2O08811 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ercc2O08811 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
Ercc2O08811 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ercc2O08811 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ercc2O08811 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ercc2O08811 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.42■□□□□ 0.06
Ercc2O08811 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ercc2O08811 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ercc2O08811 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.42■□□□□ 0.06
Ercc2O08811 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ercc2O08811 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ercc2O08811 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ercc2O08811 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
Ercc2O08811 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.42■□□□□ 0.06
Ercc2O08811 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Ercc2O08811 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ercc2O08811 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.42■□□□□ 0.06
Ercc2O08811 Gm43767-201ENSMUST00000198933 381 ntBASIC15.42■□□□□ 0.06
Ercc2O08811 Gm44771-201ENSMUST00000206975 626 ntBASIC15.42■□□□□ 0.06
Ercc2O08811 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Ercc2O08811 Gm5364-201ENSMUST00000216789 889 ntBASIC15.42■□□□□ 0.06
Ercc2O08811 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.42■□□□□ 0.06
Ercc2O08811 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ercc2O08811 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ercc2O08811 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ercc2O08811 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ercc2O08811 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.42■□□□□ 0.06
Ercc2O08811 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ercc2O08811 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ercc2O08811 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ercc2O08811 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.41■□□□□ 0.06
Ercc2O08811 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Ercc2O08811 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ercc2O08811 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ercc2O08811 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ercc2O08811 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ercc2O08811 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ercc2O08811 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ercc2O08811 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ercc2O08811 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ercc2O08811 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ercc2O08811 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ercc2O08811 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Ercc2O08811 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ercc2O08811 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ercc2O08811 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
Ercc2O08811 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ercc2O08811 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ercc2O08811 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ercc2O08811 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ercc2O08811 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ercc2O08811 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.41■□□□□ 0.06
Ercc2O08811 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ercc2O08811 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ercc2O08811 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ercc2O08811 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ercc2O08811 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ercc2O08811 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.4■□□□□ 0.06
Ercc2O08811 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ercc2O08811 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ercc2O08811 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ercc2O08811 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ercc2O08811 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ercc2O08811 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ercc2O08811 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms