Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc149F6V035 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc149F6V035 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc149F6V035 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.29■□□□□ 0.04
Ccdc149F6V035 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.29■□□□□ 0.04
Ccdc149F6V035 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc149F6V035 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.29■□□□□ 0.04
Ccdc149F6V035 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Ccdc149F6V035 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc149F6V035 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc149F6V035 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc149F6V035 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc149F6V035 AC158982.1-201ENSMUST00000228377 901 ntBASIC15.29■□□□□ 0.04
Ccdc149F6V035 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc149F6V035 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc149F6V035 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc149F6V035 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc149F6V035 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc149F6V035 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc149F6V035 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc149F6V035 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc149F6V035 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Ccdc149F6V035 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc149F6V035 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc149F6V035 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc149F6V035 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc149F6V035 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ccdc149F6V035 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc149F6V035 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc149F6V035 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc149F6V035 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.28■□□□□ 0.04
Ccdc149F6V035 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC15.28■□□□□ 0.04
Ccdc149F6V035 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc149F6V035 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ccdc149F6V035 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc149F6V035 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc149F6V035 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.28■□□□□ 0.04
Ccdc149F6V035 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc149F6V035 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc149F6V035 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc149F6V035 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc149F6V035 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc149F6V035 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc149F6V035 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Ccdc149F6V035 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc149F6V035 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc149F6V035 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Ccdc149F6V035 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc149F6V035 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc149F6V035 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.27■□□□□ 0.04
Ccdc149F6V035 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.27■□□□□ 0.04
Ccdc149F6V035 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc149F6V035 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Ccdc149F6V035 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC15.27■□□□□ 0.04
Ccdc149F6V035 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC15.27■□□□□ 0.04
Ccdc149F6V035 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc149F6V035 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc149F6V035 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Ccdc149F6V035 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc149F6V035 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.27■□□□□ 0.04
Ccdc149F6V035 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.27■□□□□ 0.04
Ccdc149F6V035 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.27■□□□□ 0.04
Ccdc149F6V035 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc149F6V035 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Ccdc149F6V035 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc149F6V035 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
Ccdc149F6V035 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc149F6V035 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc149F6V035 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc149F6V035 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc149F6V035 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc149F6V035 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Ccdc149F6V035 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc149F6V035 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc149F6V035 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc149F6V035 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc149F6V035 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc149F6V035 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc149F6V035 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc149F6V035 Gm14057-201ENSMUST00000120631 482 ntBASIC15.26■□□□□ 0.03
Ccdc149F6V035 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Ccdc149F6V035 Gm22175-201ENSMUST00000175007 78 ntBASIC15.26■□□□□ 0.03
Ccdc149F6V035 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc149F6V035 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.26■□□□□ 0.03
Ccdc149F6V035 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc149F6V035 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc149F6V035 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc149F6V035 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc149F6V035 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc149F6V035 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc149F6V035 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc149F6V035 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.26■□□□□ 0.03
Ccdc149F6V035 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc149F6V035 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc149F6V035 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc149F6V035 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc149F6V035 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc149F6V035 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc149F6V035 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.25■□□□□ 0.03
Ccdc149F6V035 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms