Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb9E9Q5G2 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdhb9E9Q5G2 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdhb9E9Q5G2 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdhb9E9Q5G2 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdhb9E9Q5G2 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdhb9E9Q5G2 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Pcdhb9E9Q5G2 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb9E9Q5G2 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Pcdhb9E9Q5G2 Gm11745-201ENSMUST00000121669 448 ntBASIC17.7■□□□□ 0.42
Pcdhb9E9Q5G2 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.7■□□□□ 0.42
Pcdhb9E9Q5G2 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb9E9Q5G2 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb9E9Q5G2 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Pcdhb9E9Q5G2 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb9E9Q5G2 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb9E9Q5G2 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb9E9Q5G2 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb9E9Q5G2 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Pcdhb9E9Q5G2 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC17.7■□□□□ 0.42
Pcdhb9E9Q5G2 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Pcdhb9E9Q5G2 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb9E9Q5G2 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.7■□□□□ 0.42
Pcdhb9E9Q5G2 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb9E9Q5G2 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb9E9Q5G2 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb9E9Q5G2 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb9E9Q5G2 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb9E9Q5G2 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.69■□□□□ 0.42
Pcdhb9E9Q5G2 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb9E9Q5G2 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Pcdhb9E9Q5G2 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Pcdhb9E9Q5G2 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb9E9Q5G2 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Pcdhb9E9Q5G2 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb9E9Q5G2 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC17.69■□□□□ 0.42
Pcdhb9E9Q5G2 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb9E9Q5G2 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb9E9Q5G2 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb9E9Q5G2 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb9E9Q5G2 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Pcdhb9E9Q5G2 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Pcdhb9E9Q5G2 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC17.69■□□□□ 0.42
Pcdhb9E9Q5G2 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Pcdhb9E9Q5G2 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb9E9Q5G2 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb9E9Q5G2 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb9E9Q5G2 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb9E9Q5G2 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.69■□□□□ 0.42
Pcdhb9E9Q5G2 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Pcdhb9E9Q5G2 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb9E9Q5G2 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Pcdhb9E9Q5G2 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb9E9Q5G2 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb9E9Q5G2 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb9E9Q5G2 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb9E9Q5G2 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb9E9Q5G2 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
Pcdhb9E9Q5G2 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Pcdhb9E9Q5G2 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb9E9Q5G2 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb9E9Q5G2 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb9E9Q5G2 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb9E9Q5G2 AC126250.1-201ENSMUST00000228343 1768 ntBASIC17.68■□□□□ 0.42
Pcdhb9E9Q5G2 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.68■□□□□ 0.42
Pcdhb9E9Q5G2 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb9E9Q5G2 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb9E9Q5G2 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb9E9Q5G2 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC17.68■□□□□ 0.42
Pcdhb9E9Q5G2 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb9E9Q5G2 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb9E9Q5G2 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC17.68■□□□□ 0.42
Pcdhb9E9Q5G2 Gm8096-201ENSMUST00000209921 1591 ntBASIC17.68■□□□□ 0.42
Pcdhb9E9Q5G2 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Pcdhb9E9Q5G2 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb9E9Q5G2 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Pcdhb9E9Q5G2 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Pcdhb9E9Q5G2 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb9E9Q5G2 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb9E9Q5G2 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb9E9Q5G2 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb9E9Q5G2 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.68■□□□□ 0.42
Pcdhb9E9Q5G2 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb9E9Q5G2 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb9E9Q5G2 Gm14780-201ENSMUST00000118387 2737 ntBASIC17.68■□□□□ 0.42
Pcdhb9E9Q5G2 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC17.68■□□□□ 0.42
Pcdhb9E9Q5G2 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb9E9Q5G2 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb9E9Q5G2 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb9E9Q5G2 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb9E9Q5G2 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb9E9Q5G2 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb9E9Q5G2 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Pcdhb9E9Q5G2 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb9E9Q5G2 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb9E9Q5G2 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb9E9Q5G2 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb9E9Q5G2 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb9E9Q5G2 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.67■□□□□ 0.42
Pcdhb9E9Q5G2 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms