Protein–RNA interactions for Protein: A0A0A6YY83

Pcdh7, Protocadherin 7, mousemouse

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh7A0A0A6YY83 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh7A0A0A6YY83 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh7A0A0A6YY83 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh7A0A0A6YY83 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh7A0A0A6YY83 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh7A0A0A6YY83 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh7A0A0A6YY83 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh7A0A0A6YY83 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh7A0A0A6YY83 Gm13597-201ENSMUST00000121239 375 ntBASIC15.51■□□□□ 0.07
Pcdh7A0A0A6YY83 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Pcdh7A0A0A6YY83 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh7A0A0A6YY83 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
Pcdh7A0A0A6YY83 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh7A0A0A6YY83 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh7A0A0A6YY83 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh7A0A0A6YY83 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh7A0A0A6YY83 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh7A0A0A6YY83 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh7A0A0A6YY83 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh7A0A0A6YY83 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh7A0A0A6YY83 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh7A0A0A6YY83 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh7A0A0A6YY83 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh7A0A0A6YY83 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh7A0A0A6YY83 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh7A0A0A6YY83 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh7A0A0A6YY83 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Pcdh7A0A0A6YY83 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh7A0A0A6YY83 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh7A0A0A6YY83 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.5■□□□□ 0.07
Pcdh7A0A0A6YY83 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.5■□□□□ 0.07
Pcdh7A0A0A6YY83 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Pcdh7A0A0A6YY83 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.5■□□□□ 0.07
Pcdh7A0A0A6YY83 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh7A0A0A6YY83 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh7A0A0A6YY83 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh7A0A0A6YY83 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh7A0A0A6YY83 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh7A0A0A6YY83 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh7A0A0A6YY83 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh7A0A0A6YY83 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh7A0A0A6YY83 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh7A0A0A6YY83 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh7A0A0A6YY83 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Pcdh7A0A0A6YY83 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.5■□□□□ 0.07
Pcdh7A0A0A6YY83 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Pcdh7A0A0A6YY83 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh7A0A0A6YY83 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh7A0A0A6YY83 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh7A0A0A6YY83 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh7A0A0A6YY83 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh7A0A0A6YY83 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh7A0A0A6YY83 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.49■□□□□ 0.07
Pcdh7A0A0A6YY83 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh7A0A0A6YY83 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh7A0A0A6YY83 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.49■□□□□ 0.07
Pcdh7A0A0A6YY83 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.49■□□□□ 0.07
Pcdh7A0A0A6YY83 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.49■□□□□ 0.07
Pcdh7A0A0A6YY83 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh7A0A0A6YY83 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.49■□□□□ 0.07
Pcdh7A0A0A6YY83 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh7A0A0A6YY83 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh7A0A0A6YY83 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh7A0A0A6YY83 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh7A0A0A6YY83 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh7A0A0A6YY83 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh7A0A0A6YY83 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh7A0A0A6YY83 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh7A0A0A6YY83 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Pcdh7A0A0A6YY83 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh7A0A0A6YY83 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh7A0A0A6YY83 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh7A0A0A6YY83 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh7A0A0A6YY83 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh7A0A0A6YY83 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Pcdh7A0A0A6YY83 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh7A0A0A6YY83 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh7A0A0A6YY83 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh7A0A0A6YY83 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Pcdh7A0A0A6YY83 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Pcdh7A0A0A6YY83 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
Pcdh7A0A0A6YY83 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh7A0A0A6YY83 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh7A0A0A6YY83 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh7A0A0A6YY83 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC15.48■□□□□ 0.07
Pcdh7A0A0A6YY83 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.48■□□□□ 0.07
Pcdh7A0A0A6YY83 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Pcdh7A0A0A6YY83 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.48■□□□□ 0.07
Pcdh7A0A0A6YY83 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.48■□□□□ 0.07
Pcdh7A0A0A6YY83 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh7A0A0A6YY83 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Pcdh7A0A0A6YY83 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.48■□□□□ 0.07
Pcdh7A0A0A6YY83 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh7A0A0A6YY83 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Pcdh7A0A0A6YY83 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh7A0A0A6YY83 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh7A0A0A6YY83 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Pcdh7A0A0A6YY83 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.48■□□□□ 0.07
Pcdh7A0A0A6YY83 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh7A0A0A6YY83 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms