Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trbc1A0A0A6YWV4 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC13.89□□□□□ -0.19
Trbc1A0A0A6YWV4 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbc1A0A0A6YWV4 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbc1A0A0A6YWV4 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbc1A0A0A6YWV4 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trbc1A0A0A6YWV4 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbc1A0A0A6YWV4 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trbc1A0A0A6YWV4 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trbc1A0A0A6YWV4 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.88□□□□□ -0.19
Trbc1A0A0A6YWV4 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
Trbc1A0A0A6YWV4 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.88□□□□□ -0.19
Trbc1A0A0A6YWV4 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbc1A0A0A6YWV4 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Trbc1A0A0A6YWV4 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trbc1A0A0A6YWV4 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbc1A0A0A6YWV4 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbc1A0A0A6YWV4 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbc1A0A0A6YWV4 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trbc1A0A0A6YWV4 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbc1A0A0A6YWV4 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbc1A0A0A6YWV4 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trbc1A0A0A6YWV4 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trbc1A0A0A6YWV4 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.88□□□□□ -0.19
Trbc1A0A0A6YWV4 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.88□□□□□ -0.19
Trbc1A0A0A6YWV4 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.88□□□□□ -0.19
Trbc1A0A0A6YWV4 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Trbc1A0A0A6YWV4 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.88□□□□□ -0.19
Trbc1A0A0A6YWV4 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.88□□□□□ -0.19
Trbc1A0A0A6YWV4 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.88□□□□□ -0.19
Trbc1A0A0A6YWV4 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.88□□□□□ -0.19
Trbc1A0A0A6YWV4 Gm5364-201ENSMUST00000216789 889 ntBASIC13.88□□□□□ -0.19
Trbc1A0A0A6YWV4 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbc1A0A0A6YWV4 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbc1A0A0A6YWV4 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trbc1A0A0A6YWV4 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbc1A0A0A6YWV4 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbc1A0A0A6YWV4 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trbc1A0A0A6YWV4 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbc1A0A0A6YWV4 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.88□□□□□ -0.19
Trbc1A0A0A6YWV4 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbc1A0A0A6YWV4 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbc1A0A0A6YWV4 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbc1A0A0A6YWV4 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trbc1A0A0A6YWV4 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbc1A0A0A6YWV4 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbc1A0A0A6YWV4 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbc1A0A0A6YWV4 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Trbc1A0A0A6YWV4 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.87□□□□□ -0.19
Trbc1A0A0A6YWV4 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbc1A0A0A6YWV4 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbc1A0A0A6YWV4 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.87□□□□□ -0.19
Trbc1A0A0A6YWV4 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.87□□□□□ -0.19
Trbc1A0A0A6YWV4 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.87□□□□□ -0.19
Trbc1A0A0A6YWV4 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.87□□□□□ -0.19
Trbc1A0A0A6YWV4 Gm8318-201ENSMUST00000182954 872 ntBASIC13.87□□□□□ -0.19
Trbc1A0A0A6YWV4 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.87□□□□□ -0.19
Trbc1A0A0A6YWV4 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbc1A0A0A6YWV4 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Trbc1A0A0A6YWV4 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbc1A0A0A6YWV4 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.87□□□□□ -0.19
Trbc1A0A0A6YWV4 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbc1A0A0A6YWV4 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbc1A0A0A6YWV4 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbc1A0A0A6YWV4 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbc1A0A0A6YWV4 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trbc1A0A0A6YWV4 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.87□□□□□ -0.19
Trbc1A0A0A6YWV4 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.87□□□□□ -0.19
Trbc1A0A0A6YWV4 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbc1A0A0A6YWV4 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbc1A0A0A6YWV4 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbc1A0A0A6YWV4 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trbc1A0A0A6YWV4 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbc1A0A0A6YWV4 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.86□□□□□ -0.19
Trbc1A0A0A6YWV4 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.86□□□□□ -0.19
Trbc1A0A0A6YWV4 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Trbc1A0A0A6YWV4 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.86□□□□□ -0.19
Trbc1A0A0A6YWV4 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.86□□□□□ -0.19
Trbc1A0A0A6YWV4 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trbc1A0A0A6YWV4 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbc1A0A0A6YWV4 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbc1A0A0A6YWV4 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trbc1A0A0A6YWV4 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trbc1A0A0A6YWV4 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trbc1A0A0A6YWV4 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.86□□□□□ -0.19
Trbc1A0A0A6YWV4 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbc1A0A0A6YWV4 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbc1A0A0A6YWV4 Grk6-207ENSMUST00000225925 2769 ntBASIC13.86□□□□□ -0.19
Trbc1A0A0A6YWV4 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbc1A0A0A6YWV4 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.86□□□□□ -0.19
Trbc1A0A0A6YWV4 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbc1A0A0A6YWV4 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trbc1A0A0A6YWV4 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbc1A0A0A6YWV4 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbc1A0A0A6YWV4 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbc1A0A0A6YWV4 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbc1A0A0A6YWV4 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbc1A0A0A6YWV4 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Trbc1A0A0A6YWV4 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trbc1A0A0A6YWV4 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms