Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Gm15794-201ENSMUST00000120182 631 ntBASIC12.35□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.34□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.34□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 AC112142.1-201ENSMUST00000228796 918 ntBASIC12.34□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.34□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav15-2-dv6-2A0A075B650 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.33□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.33□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Gm17808-201ENSMUST00000200859 894 ntBASIC12.33□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav15-2-dv6-2A0A075B650 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms