Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16d-dv11A0A075B617 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16d-dv11A0A075B617 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16d-dv11A0A075B617 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.11□□□□□ -0.63
Trav16d-dv11A0A075B617 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16d-dv11A0A075B617 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16d-dv11A0A075B617 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16d-dv11A0A075B617 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16d-dv11A0A075B617 Gm14780-201ENSMUST00000118387 2737 ntBASIC11.11□□□□□ -0.63
Trav16d-dv11A0A075B617 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16d-dv11A0A075B617 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16d-dv11A0A075B617 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16d-dv11A0A075B617 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16d-dv11A0A075B617 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16d-dv11A0A075B617 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Trav16d-dv11A0A075B617 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC11.11□□□□□ -0.63
Trav16d-dv11A0A075B617 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav16d-dv11A0A075B617 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16d-dv11A0A075B617 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16d-dv11A0A075B617 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16d-dv11A0A075B617 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trav16d-dv11A0A075B617 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16d-dv11A0A075B617 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16d-dv11A0A075B617 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Trav16d-dv11A0A075B617 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16d-dv11A0A075B617 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Trav16d-dv11A0A075B617 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16d-dv11A0A075B617 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16d-dv11A0A075B617 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16d-dv11A0A075B617 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16d-dv11A0A075B617 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16d-dv11A0A075B617 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16d-dv11A0A075B617 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16d-dv11A0A075B617 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
Trav16d-dv11A0A075B617 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16d-dv11A0A075B617 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trav16d-dv11A0A075B617 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16d-dv11A0A075B617 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16d-dv11A0A075B617 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16d-dv11A0A075B617 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16d-dv11A0A075B617 Gm16061-201ENSMUST00000122167 857 ntBASIC11.1□□□□□ -0.63
Trav16d-dv11A0A075B617 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trav16d-dv11A0A075B617 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC11.1□□□□□ -0.63
Trav16d-dv11A0A075B617 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16d-dv11A0A075B617 Arhgef4-208ENSMUST00000211073 171 ntBASIC11.1□□□□□ -0.63
Trav16d-dv11A0A075B617 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC11.1□□□□□ -0.63
Trav16d-dv11A0A075B617 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16d-dv11A0A075B617 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16d-dv11A0A075B617 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Trav16d-dv11A0A075B617 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16d-dv11A0A075B617 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16d-dv11A0A075B617 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16d-dv11A0A075B617 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16d-dv11A0A075B617 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16d-dv11A0A075B617 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC11.1□□□□□ -0.63
Trav16d-dv11A0A075B617 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16d-dv11A0A075B617 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16d-dv11A0A075B617 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16d-dv11A0A075B617 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16d-dv11A0A075B617 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav16d-dv11A0A075B617 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16d-dv11A0A075B617 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16d-dv11A0A075B617 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16d-dv11A0A075B617 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16d-dv11A0A075B617 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16d-dv11A0A075B617 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trav16d-dv11A0A075B617 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16d-dv11A0A075B617 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16d-dv11A0A075B617 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16d-dv11A0A075B617 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16d-dv11A0A075B617 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16d-dv11A0A075B617 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16d-dv11A0A075B617 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Trav16d-dv11A0A075B617 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Trav16d-dv11A0A075B617 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16d-dv11A0A075B617 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16d-dv11A0A075B617 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16d-dv11A0A075B617 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Trav16d-dv11A0A075B617 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Trav16d-dv11A0A075B617 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Trav16d-dv11A0A075B617 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16d-dv11A0A075B617 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC11.09□□□□□ -0.63
Trav16d-dv11A0A075B617 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trav16d-dv11A0A075B617 Gm3272-201ENSMUST00000181181 1229 ntBASIC11.09□□□□□ -0.63
Trav16d-dv11A0A075B617 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16d-dv11A0A075B617 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16d-dv11A0A075B617 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16d-dv11A0A075B617 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16d-dv11A0A075B617 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16d-dv11A0A075B617 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16d-dv11A0A075B617 Gm10566-201ENSMUST00000086739 996 ntBASIC11.09□□□□□ -0.63
Trav16d-dv11A0A075B617 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav16d-dv11A0A075B617 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16d-dv11A0A075B617 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16d-dv11A0A075B617 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16d-dv11A0A075B617 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16d-dv11A0A075B617 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Trav16d-dv11A0A075B617 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav16d-dv11A0A075B617 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.09□□□□□ -0.63
Trav16d-dv11A0A075B617 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms