Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.9□□□□□ -0.34
Rbfox1Q9JJ43 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC12.9□□□□□ -0.34
Rbfox1Q9JJ43 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rbfox1Q9JJ43 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rbfox1Q9JJ43 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rbfox1Q9JJ43 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Rbfox1Q9JJ43 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rbfox1Q9JJ43 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Rbfox1Q9JJ43 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rbfox1Q9JJ43 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rbfox1Q9JJ43 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rbfox1Q9JJ43 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rbfox1Q9JJ43 Celf4-206ENSMUST00000224553 1729 ntBASIC12.9□□□□□ -0.34
Rbfox1Q9JJ43 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rbfox1Q9JJ43 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rbfox1Q9JJ43 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.9□□□□□ -0.35
Rbfox1Q9JJ43 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Rbfox1Q9JJ43 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Rbfox1Q9JJ43 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rbfox1Q9JJ43 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rbfox1Q9JJ43 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Rbfox1Q9JJ43 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rbfox1Q9JJ43 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rbfox1Q9JJ43 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Rbfox1Q9JJ43 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.89□□□□□ -0.35
Rbfox1Q9JJ43 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rbfox1Q9JJ43 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rbfox1Q9JJ43 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Rbfox1Q9JJ43 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rbfox1Q9JJ43 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rbfox1Q9JJ43 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.89□□□□□ -0.35
Rbfox1Q9JJ43 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC12.89□□□□□ -0.35
Rbfox1Q9JJ43 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rbfox1Q9JJ43 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rbfox1Q9JJ43 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rbfox1Q9JJ43 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Rbfox1Q9JJ43 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rbfox1Q9JJ43 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rbfox1Q9JJ43 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Rbfox1Q9JJ43 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rbfox1Q9JJ43 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rbfox1Q9JJ43 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rbfox1Q9JJ43 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.89□□□□□ -0.35
Rbfox1Q9JJ43 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.89□□□□□ -0.35
Rbfox1Q9JJ43 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rbfox1Q9JJ43 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rbfox1Q9JJ43 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rbfox1Q9JJ43 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.89□□□□□ -0.35
Rbfox1Q9JJ43 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rbfox1Q9JJ43 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Rbfox1Q9JJ43 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rbfox1Q9JJ43 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rbfox1Q9JJ43 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.89□□□□□ -0.35
Rbfox1Q9JJ43 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rbfox1Q9JJ43 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rbfox1Q9JJ43 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rbfox1Q9JJ43 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.88□□□□□ -0.35
Rbfox1Q9JJ43 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rbfox1Q9JJ43 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rbfox1Q9JJ43 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Rbfox1Q9JJ43 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.88□□□□□ -0.35
Rbfox1Q9JJ43 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Rbfox1Q9JJ43 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rbfox1Q9JJ43 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rbfox1Q9JJ43 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rbfox1Q9JJ43 Gm13836-201ENSMUST00000121159 501 ntBASIC12.88□□□□□ -0.35
Rbfox1Q9JJ43 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Rbfox1Q9JJ43 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rbfox1Q9JJ43 Gm27867-201ENSMUST00000184778 125 ntBASIC12.88□□□□□ -0.35
Rbfox1Q9JJ43 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Rbfox1Q9JJ43 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Rbfox1Q9JJ43 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Rbfox1Q9JJ43 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rbfox1Q9JJ43 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rbfox1Q9JJ43 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rbfox1Q9JJ43 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rbfox1Q9JJ43 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rbfox1Q9JJ43 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rbfox1Q9JJ43 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rbfox1Q9JJ43 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rbfox1Q9JJ43 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Rbfox1Q9JJ43 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rbfox1Q9JJ43 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.88□□□□□ -0.35
Rbfox1Q9JJ43 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rbfox1Q9JJ43 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rbfox1Q9JJ43 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rbfox1Q9JJ43 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Rbfox1Q9JJ43 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Rbfox1Q9JJ43 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rbfox1Q9JJ43 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.87□□□□□ -0.35
Rbfox1Q9JJ43 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rbfox1Q9JJ43 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rbfox1Q9JJ43 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rbfox1Q9JJ43 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rbfox1Q9JJ43 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rbfox1Q9JJ43 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Rbfox1Q9JJ43 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rbfox1Q9JJ43 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rbfox1Q9JJ43 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rbfox1Q9JJ43 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms