Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hdhd3Q9CYW4 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Hdhd3Q9CYW4 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hdhd3Q9CYW4 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hdhd3Q9CYW4 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hdhd3Q9CYW4 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hdhd3Q9CYW4 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hdhd3Q9CYW4 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hdhd3Q9CYW4 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hdhd3Q9CYW4 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hdhd3Q9CYW4 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hdhd3Q9CYW4 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hdhd3Q9CYW4 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hdhd3Q9CYW4 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Hdhd3Q9CYW4 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hdhd3Q9CYW4 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hdhd3Q9CYW4 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hdhd3Q9CYW4 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hdhd3Q9CYW4 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hdhd3Q9CYW4 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hdhd3Q9CYW4 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hdhd3Q9CYW4 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Hdhd3Q9CYW4 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Hdhd3Q9CYW4 AC134329.2-201ENSMUST00000217897 428 ntBASIC12.31□□□□□ -0.44
Hdhd3Q9CYW4 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hdhd3Q9CYW4 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hdhd3Q9CYW4 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Hdhd3Q9CYW4 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Hdhd3Q9CYW4 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hdhd3Q9CYW4 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hdhd3Q9CYW4 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hdhd3Q9CYW4 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hdhd3Q9CYW4 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Hdhd3Q9CYW4 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hdhd3Q9CYW4 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hdhd3Q9CYW4 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hdhd3Q9CYW4 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hdhd3Q9CYW4 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hdhd3Q9CYW4 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Hdhd3Q9CYW4 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hdhd3Q9CYW4 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.3□□□□□ -0.44
Hdhd3Q9CYW4 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Hdhd3Q9CYW4 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hdhd3Q9CYW4 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hdhd3Q9CYW4 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hdhd3Q9CYW4 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Hdhd3Q9CYW4 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hdhd3Q9CYW4 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hdhd3Q9CYW4 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hdhd3Q9CYW4 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hdhd3Q9CYW4 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC12.3□□□□□ -0.44
Hdhd3Q9CYW4 Gm22697-201ENSMUST00000175194 63 ntBASIC12.3□□□□□ -0.44
Hdhd3Q9CYW4 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12.3□□□□□ -0.44
Hdhd3Q9CYW4 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Hdhd3Q9CYW4 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC12.3□□□□□ -0.44
Hdhd3Q9CYW4 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hdhd3Q9CYW4 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hdhd3Q9CYW4 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hdhd3Q9CYW4 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Hdhd3Q9CYW4 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Hdhd3Q9CYW4 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.3□□□□□ -0.44
Hdhd3Q9CYW4 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.3□□□□□ -0.44
Hdhd3Q9CYW4 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hdhd3Q9CYW4 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hdhd3Q9CYW4 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hdhd3Q9CYW4 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hdhd3Q9CYW4 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hdhd3Q9CYW4 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hdhd3Q9CYW4 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hdhd3Q9CYW4 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hdhd3Q9CYW4 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.3□□□□□ -0.44
Hdhd3Q9CYW4 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hdhd3Q9CYW4 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.3□□□□□ -0.44
Hdhd3Q9CYW4 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Hdhd3Q9CYW4 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Hdhd3Q9CYW4 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hdhd3Q9CYW4 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hdhd3Q9CYW4 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.29□□□□□ -0.44
Hdhd3Q9CYW4 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hdhd3Q9CYW4 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hdhd3Q9CYW4 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Hdhd3Q9CYW4 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hdhd3Q9CYW4 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hdhd3Q9CYW4 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hdhd3Q9CYW4 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hdhd3Q9CYW4 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hdhd3Q9CYW4 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hdhd3Q9CYW4 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hdhd3Q9CYW4 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hdhd3Q9CYW4 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Hdhd3Q9CYW4 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hdhd3Q9CYW4 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.29□□□□□ -0.44
Hdhd3Q9CYW4 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC12.29□□□□□ -0.44
Hdhd3Q9CYW4 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.29□□□□□ -0.44
Hdhd3Q9CYW4 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC12.29□□□□□ -0.44
Hdhd3Q9CYW4 Gm43799-201ENSMUST00000201845 579 ntBASIC12.29□□□□□ -0.44
Hdhd3Q9CYW4 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.29□□□□□ -0.44
Hdhd3Q9CYW4 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hdhd3Q9CYW4 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Hdhd3Q9CYW4 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms