Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Ssu72Q9CY97 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ssu72Q9CY97 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ssu72Q9CY97 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ssu72Q9CY97 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ssu72Q9CY97 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Ssu72Q9CY97 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ssu72Q9CY97 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ssu72Q9CY97 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15□□□□□ -0.01
Ssu72Q9CY97 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15□□□□□ -0.01
Ssu72Q9CY97 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ssu72Q9CY97 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15□□□□□ -0.01
Ssu72Q9CY97 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ssu72Q9CY97 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ssu72Q9CY97 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ssu72Q9CY97 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Ssu72Q9CY97 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15□□□□□ -0.01
Ssu72Q9CY97 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ssu72Q9CY97 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Ssu72Q9CY97 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ssu72Q9CY97 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ssu72Q9CY97 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ssu72Q9CY97 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ssu72Q9CY97 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
Ssu72Q9CY97 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ssu72Q9CY97 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Ssu72Q9CY97 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Ssu72Q9CY97 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ssu72Q9CY97 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Ssu72Q9CY97 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ssu72Q9CY97 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Ssu72Q9CY97 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ssu72Q9CY97 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ssu72Q9CY97 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ssu72Q9CY97 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ssu72Q9CY97 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Ssu72Q9CY97 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ssu72Q9CY97 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ssu72Q9CY97 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ssu72Q9CY97 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.99□□□□□ -0.01
Ssu72Q9CY97 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.99□□□□□ -0.01
Ssu72Q9CY97 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ssu72Q9CY97 Gm17808-201ENSMUST00000200859 894 ntBASIC14.99□□□□□ -0.01
Ssu72Q9CY97 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.99□□□□□ -0.01
Ssu72Q9CY97 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC14.99□□□□□ -0.01
Ssu72Q9CY97 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ssu72Q9CY97 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ssu72Q9CY97 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ssu72Q9CY97 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ssu72Q9CY97 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ssu72Q9CY97 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ssu72Q9CY97 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ssu72Q9CY97 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Ssu72Q9CY97 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ssu72Q9CY97 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.99□□□□□ -0.01
Ssu72Q9CY97 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ssu72Q9CY97 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.98□□□□□ -0.01
Ssu72Q9CY97 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ssu72Q9CY97 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Ssu72Q9CY97 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ssu72Q9CY97 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Ssu72Q9CY97 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ssu72Q9CY97 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ssu72Q9CY97 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ssu72Q9CY97 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ssu72Q9CY97 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ssu72Q9CY97 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ssu72Q9CY97 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ssu72Q9CY97 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ssu72Q9CY97 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ssu72Q9CY97 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ssu72Q9CY97 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ssu72Q9CY97 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ssu72Q9CY97 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.98□□□□□ -0.01
Ssu72Q9CY97 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ssu72Q9CY97 Gm4459-201ENSMUST00000118750 468 ntBASIC14.98□□□□□ -0.01
Ssu72Q9CY97 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.98□□□□□ -0.01
Ssu72Q9CY97 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ssu72Q9CY97 Gm25745-201ENSMUST00000174945 133 ntBASIC14.98□□□□□ -0.01
Ssu72Q9CY97 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.98□□□□□ -0.01
Ssu72Q9CY97 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.98□□□□□ -0.01
Ssu72Q9CY97 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ssu72Q9CY97 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ssu72Q9CY97 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ssu72Q9CY97 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ssu72Q9CY97 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Ssu72Q9CY97 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
Ssu72Q9CY97 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.98□□□□□ -0.01
Ssu72Q9CY97 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ssu72Q9CY97 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ssu72Q9CY97 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Ssu72Q9CY97 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ssu72Q9CY97 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ssu72Q9CY97 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Ssu72Q9CY97 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ssu72Q9CY97 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.98□□□□□ -0.01
Ssu72Q9CY97 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ssu72Q9CY97 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ssu72Q9CY97 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ssu72Q9CY97 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms