Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
SMARCC1Q92922 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC22.96■■□□□ 1.27
SMARCC1Q92922 MIR4469-201ENST00000583919 79 ntBASIC22.96■■□□□ 1.27
SMARCC1Q92922 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC22.96■■□□□ 1.27
SMARCC1Q92922 AC073592.5-201ENST00000624854 528 ntBASIC22.96■■□□□ 1.27
SMARCC1Q92922 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC22.96■■□□□ 1.27
SMARCC1Q92922 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
SMARCC1Q92922 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC22.96■■□□□ 1.27
SMARCC1Q92922 GMCL1P1-201ENST00000463439 1581 ntBASIC22.96■■□□□ 1.27
SMARCC1Q92922 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC22.96■■□□□ 1.27
SMARCC1Q92922 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC22.96■■□□□ 1.27
SMARCC1Q92922 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SMARCC1Q92922 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC22.96■■□□□ 1.27
SMARCC1Q92922 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SMARCC1Q92922 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SMARCC1Q92922 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
SMARCC1Q92922 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SMARCC1Q92922 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SMARCC1Q92922 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SMARCC1Q92922 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SMARCC1Q92922 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC22.95■■□□□ 1.26
SMARCC1Q92922 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SMARCC1Q92922 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SMARCC1Q92922 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC22.95■■□□□ 1.26
SMARCC1Q92922 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SMARCC1Q92922 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SMARCC1Q92922 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SMARCC1Q92922 CYMP-203ENST00000474680 1263 ntBASIC22.95■■□□□ 1.26
SMARCC1Q92922 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
SMARCC1Q92922 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SMARCC1Q92922 RFPL4AP1-201ENST00000530883 850 ntBASIC22.95■■□□□ 1.26
SMARCC1Q92922 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC22.95■■□□□ 1.26
SMARCC1Q92922 KRT8P47-201ENST00000604727 1398 ntBASIC22.95■■□□□ 1.26
SMARCC1Q92922 C20orf181-201ENST00000623918 480 ntBASIC22.95■■□□□ 1.26
SMARCC1Q92922 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC22.95■■□□□ 1.26
SMARCC1Q92922 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
SMARCC1Q92922 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC22.94■■□□□ 1.26
SMARCC1Q92922 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC22.94■■□□□ 1.26
SMARCC1Q92922 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SMARCC1Q92922 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SMARCC1Q92922 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
SMARCC1Q92922 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SMARCC1Q92922 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
SMARCC1Q92922 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SMARCC1Q92922 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
SMARCC1Q92922 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
SMARCC1Q92922 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
SMARCC1Q92922 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC22.94■■□□□ 1.26
SMARCC1Q92922 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC22.94■■□□□ 1.26
SMARCC1Q92922 ALG1L5P-201ENST00000482043 771 ntBASIC22.94■■□□□ 1.26
SMARCC1Q92922 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC22.94■■□□□ 1.26
SMARCC1Q92922 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC22.94■■□□□ 1.26
SMARCC1Q92922 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC22.94■■□□□ 1.26
SMARCC1Q92922 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SMARCC1Q92922 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SMARCC1Q92922 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
SMARCC1Q92922 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SMARCC1Q92922 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
SMARCC1Q92922 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC22.93■■□□□ 1.26
SMARCC1Q92922 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
SMARCC1Q92922 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC22.93■■□□□ 1.26
SMARCC1Q92922 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
SMARCC1Q92922 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC22.93■■□□□ 1.26
SMARCC1Q92922 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
SMARCC1Q92922 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC22.93■■□□□ 1.26
SMARCC1Q92922 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC22.93■■□□□ 1.26
SMARCC1Q92922 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SMARCC1Q92922 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
SMARCC1Q92922 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC22.93■■□□□ 1.26
SMARCC1Q92922 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SMARCC1Q92922 AL020989.1-201ENST00000422979 469 ntBASIC22.93■■□□□ 1.26
SMARCC1Q92922 PON3-203ENST00000427422 894 ntTSL 3 BASIC22.93■■□□□ 1.26
SMARCC1Q92922 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
SMARCC1Q92922 ARTN-206ENST00000472435 402 ntTSL 3 BASIC22.93■■□□□ 1.26
SMARCC1Q92922 MIR3197-201ENST00000582241 73 ntBASIC22.93■■□□□ 1.26
SMARCC1Q92922 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC22.93■■□□□ 1.26
SMARCC1Q92922 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
SMARCC1Q92922 AC092865.6-201ENST00000642101 219 ntBASIC22.93■■□□□ 1.26
SMARCC1Q92922 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SMARCC1Q92922 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC22.93■■□□□ 1.26
SMARCC1Q92922 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
SMARCC1Q92922 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC22.93■■□□□ 1.26
SMARCC1Q92922 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
SMARCC1Q92922 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
SMARCC1Q92922 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
SMARCC1Q92922 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC22.93■■□□□ 1.26
SMARCC1Q92922 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SMARCC1Q92922 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SMARCC1Q92922 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SMARCC1Q92922 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
SMARCC1Q92922 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SMARCC1Q92922 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SMARCC1Q92922 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
SMARCC1Q92922 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SMARCC1Q92922 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
SMARCC1Q92922 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
SMARCC1Q92922 ELK2BP-201ENST00000415014 1224 ntBASIC22.92■■□□□ 1.26
SMARCC1Q92922 VN2R19P-201ENST00000442399 1052 ntBASIC22.92■■□□□ 1.26
SMARCC1Q92922 PON3-205ENST00000451904 1053 ntTSL 3 BASIC22.92■■□□□ 1.26
SMARCC1Q92922 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC22.92■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms