Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smc1bQ920F6 Gm25948-201ENSMUST00000175334 112 ntBASIC17.43■□□□□ 0.38
Smc1bQ920F6 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC17.43■□□□□ 0.38
Smc1bQ920F6 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC17.43■□□□□ 0.38
Smc1bQ920F6 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC17.43■□□□□ 0.38
Smc1bQ920F6 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Smc1bQ920F6 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smc1bQ920F6 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Smc1bQ920F6 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smc1bQ920F6 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smc1bQ920F6 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Smc1bQ920F6 App-207ENSMUST00000227737 2827 ntBASIC17.43■□□□□ 0.38
Smc1bQ920F6 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smc1bQ920F6 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smc1bQ920F6 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Smc1bQ920F6 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.42■□□□□ 0.38
Smc1bQ920F6 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Smc1bQ920F6 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smc1bQ920F6 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smc1bQ920F6 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smc1bQ920F6 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smc1bQ920F6 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Smc1bQ920F6 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smc1bQ920F6 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Smc1bQ920F6 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smc1bQ920F6 Gm12892-201ENSMUST00000117367 1146 ntBASIC17.42■□□□□ 0.38
Smc1bQ920F6 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC17.42■□□□□ 0.38
Smc1bQ920F6 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Smc1bQ920F6 Gm18489-201ENSMUST00000172565 551 ntBASIC17.42■□□□□ 0.38
Smc1bQ920F6 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC17.42■□□□□ 0.38
Smc1bQ920F6 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Smc1bQ920F6 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Smc1bQ920F6 Gm45747-201ENSMUST00000212203 999 ntBASIC17.42■□□□□ 0.38
Smc1bQ920F6 AC140397.2-201ENSMUST00000224213 834 ntBASIC17.42■□□□□ 0.38
Smc1bQ920F6 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smc1bQ920F6 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smc1bQ920F6 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smc1bQ920F6 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smc1bQ920F6 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smc1bQ920F6 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smc1bQ920F6 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Smc1bQ920F6 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Smc1bQ920F6 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Smc1bQ920F6 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Smc1bQ920F6 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.42■□□□□ 0.38
Smc1bQ920F6 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smc1bQ920F6 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Smc1bQ920F6 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smc1bQ920F6 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smc1bQ920F6 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Smc1bQ920F6 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Smc1bQ920F6 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Smc1bQ920F6 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Smc1bQ920F6 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.41■□□□□ 0.38
Smc1bQ920F6 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smc1bQ920F6 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smc1bQ920F6 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smc1bQ920F6 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC17.41■□□□□ 0.38
Smc1bQ920F6 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
Smc1bQ920F6 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Smc1bQ920F6 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Smc1bQ920F6 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Smc1bQ920F6 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC17.41■□□□□ 0.38
Smc1bQ920F6 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smc1bQ920F6 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC17.41■□□□□ 0.38
Smc1bQ920F6 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC17.41■□□□□ 0.38
Smc1bQ920F6 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC17.41■□□□□ 0.38
Smc1bQ920F6 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smc1bQ920F6 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smc1bQ920F6 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Smc1bQ920F6 Gm5366-201ENSMUST00000215494 1338 ntBASIC17.41■□□□□ 0.38
Smc1bQ920F6 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Smc1bQ920F6 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Smc1bQ920F6 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Smc1bQ920F6 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smc1bQ920F6 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smc1bQ920F6 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.41■□□□□ 0.38
Smc1bQ920F6 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smc1bQ920F6 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smc1bQ920F6 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smc1bQ920F6 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smc1bQ920F6 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Smc1bQ920F6 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smc1bQ920F6 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smc1bQ920F6 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Smc1bQ920F6 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.4■□□□□ 0.38
Smc1bQ920F6 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smc1bQ920F6 Gm11745-201ENSMUST00000121669 448 ntBASIC17.4■□□□□ 0.38
Smc1bQ920F6 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC17.4■□□□□ 0.38
Smc1bQ920F6 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Smc1bQ920F6 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Smc1bQ920F6 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smc1bQ920F6 Gm5177-201ENSMUST00000183092 997 ntBASIC17.4■□□□□ 0.38
Smc1bQ920F6 Mir6990-201ENSMUST00000183724 91 ntBASIC17.4■□□□□ 0.38
Smc1bQ920F6 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smc1bQ920F6 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smc1bQ920F6 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Smc1bQ920F6 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Smc1bQ920F6 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smc1bQ920F6 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms