Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TraipQ8VIG6 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TraipQ8VIG6 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TraipQ8VIG6 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
TraipQ8VIG6 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TraipQ8VIG6 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TraipQ8VIG6 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TraipQ8VIG6 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TraipQ8VIG6 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TraipQ8VIG6 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC16.05■□□□□ 0.16
TraipQ8VIG6 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
TraipQ8VIG6 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC16.05■□□□□ 0.16
TraipQ8VIG6 AC153961.1-201ENSMUST00000217760 385 ntBASIC16.05■□□□□ 0.16
TraipQ8VIG6 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.05■□□□□ 0.16
TraipQ8VIG6 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TraipQ8VIG6 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.05■□□□□ 0.16
TraipQ8VIG6 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TraipQ8VIG6 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.05■□□□□ 0.16
TraipQ8VIG6 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TraipQ8VIG6 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TraipQ8VIG6 Dancr-204ENSMUST00000132389 2347 ntBASIC16.05■□□□□ 0.16
TraipQ8VIG6 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TraipQ8VIG6 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TraipQ8VIG6 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TraipQ8VIG6 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TraipQ8VIG6 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TraipQ8VIG6 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TraipQ8VIG6 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.04■□□□□ 0.16
TraipQ8VIG6 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TraipQ8VIG6 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TraipQ8VIG6 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.04■□□□□ 0.16
TraipQ8VIG6 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TraipQ8VIG6 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TraipQ8VIG6 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC16.04■□□□□ 0.16
TraipQ8VIG6 Gm25948-201ENSMUST00000175334 112 ntBASIC16.04■□□□□ 0.16
TraipQ8VIG6 Gm27430-201ENSMUST00000184585 107 ntBASIC16.04■□□□□ 0.16
TraipQ8VIG6 Gm10576-201ENSMUST00000191927 825 ntBASIC16.04■□□□□ 0.16
TraipQ8VIG6 Gm38225-201ENSMUST00000194001 393 ntBASIC16.04■□□□□ 0.16
TraipQ8VIG6 Gm44333-201ENSMUST00000197168 107 ntBASIC16.04■□□□□ 0.16
TraipQ8VIG6 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TraipQ8VIG6 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TraipQ8VIG6 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TraipQ8VIG6 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TraipQ8VIG6 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TraipQ8VIG6 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TraipQ8VIG6 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TraipQ8VIG6 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TraipQ8VIG6 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TraipQ8VIG6 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TraipQ8VIG6 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TraipQ8VIG6 Gm8242-201ENSMUST00000193029 1420 ntBASIC16.03■□□□□ 0.16
TraipQ8VIG6 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TraipQ8VIG6 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TraipQ8VIG6 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TraipQ8VIG6 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TraipQ8VIG6 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TraipQ8VIG6 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TraipQ8VIG6 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TraipQ8VIG6 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC16.03■□□□□ 0.16
TraipQ8VIG6 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TraipQ8VIG6 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TraipQ8VIG6 AA543401-201ENSMUST00000164248 1269 ntBASIC16.03■□□□□ 0.16
TraipQ8VIG6 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC16.03■□□□□ 0.16
TraipQ8VIG6 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TraipQ8VIG6 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TraipQ8VIG6 Gm7774-201ENSMUST00000200064 533 ntBASIC16.03■□□□□ 0.16
TraipQ8VIG6 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC16.03■□□□□ 0.16
TraipQ8VIG6 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC16.03■□□□□ 0.16
TraipQ8VIG6 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC16.03■□□□□ 0.16
TraipQ8VIG6 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TraipQ8VIG6 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TraipQ8VIG6 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
TraipQ8VIG6 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TraipQ8VIG6 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TraipQ8VIG6 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TraipQ8VIG6 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TraipQ8VIG6 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TraipQ8VIG6 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TraipQ8VIG6 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TraipQ8VIG6 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
TraipQ8VIG6 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
TraipQ8VIG6 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TraipQ8VIG6 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TraipQ8VIG6 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TraipQ8VIG6 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TraipQ8VIG6 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TraipQ8VIG6 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TraipQ8VIG6 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TraipQ8VIG6 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TraipQ8VIG6 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TraipQ8VIG6 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC16.02■□□□□ 0.16
TraipQ8VIG6 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC16.02■□□□□ 0.16
TraipQ8VIG6 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TraipQ8VIG6 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TraipQ8VIG6 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TraipQ8VIG6 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
TraipQ8VIG6 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TraipQ8VIG6 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC16.02■□□□□ 0.15
TraipQ8VIG6 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TraipQ8VIG6 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms