Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.76■□□□□ 0.43
Shtn1Q8K2Q9 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Shtn1Q8K2Q9 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shtn1Q8K2Q9 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Shtn1Q8K2Q9 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Shtn1Q8K2Q9 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shtn1Q8K2Q9 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shtn1Q8K2Q9 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Shtn1Q8K2Q9 Gm14722-201ENSMUST00000118943 689 ntBASIC17.76■□□□□ 0.43
Shtn1Q8K2Q9 Gm12490-201ENSMUST00000120255 560 ntBASIC17.76■□□□□ 0.43
Shtn1Q8K2Q9 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC17.76■□□□□ 0.43
Shtn1Q8K2Q9 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Shtn1Q8K2Q9 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC17.76■□□□□ 0.43
Shtn1Q8K2Q9 AC132467.2-202ENSMUST00000227726 559 ntBASIC17.76■□□□□ 0.43
Shtn1Q8K2Q9 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shtn1Q8K2Q9 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shtn1Q8K2Q9 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Shtn1Q8K2Q9 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shtn1Q8K2Q9 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC17.76■□□□□ 0.43
Shtn1Q8K2Q9 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shtn1Q8K2Q9 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.76■□□□□ 0.43
Shtn1Q8K2Q9 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shtn1Q8K2Q9 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC17.76■□□□□ 0.43
Shtn1Q8K2Q9 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Shtn1Q8K2Q9 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shtn1Q8K2Q9 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shtn1Q8K2Q9 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Shtn1Q8K2Q9 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Shtn1Q8K2Q9 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shtn1Q8K2Q9 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shtn1Q8K2Q9 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shtn1Q8K2Q9 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC17.75■□□□□ 0.43
Shtn1Q8K2Q9 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shtn1Q8K2Q9 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Shtn1Q8K2Q9 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shtn1Q8K2Q9 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Shtn1Q8K2Q9 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shtn1Q8K2Q9 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shtn1Q8K2Q9 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Shtn1Q8K2Q9 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shtn1Q8K2Q9 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Shtn1Q8K2Q9 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shtn1Q8K2Q9 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shtn1Q8K2Q9 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Shtn1Q8K2Q9 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Shtn1Q8K2Q9 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shtn1Q8K2Q9 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Shtn1Q8K2Q9 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Shtn1Q8K2Q9 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Shtn1Q8K2Q9 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shtn1Q8K2Q9 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shtn1Q8K2Q9 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shtn1Q8K2Q9 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Shtn1Q8K2Q9 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shtn1Q8K2Q9 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shtn1Q8K2Q9 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shtn1Q8K2Q9 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Shtn1Q8K2Q9 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Shtn1Q8K2Q9 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shtn1Q8K2Q9 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shtn1Q8K2Q9 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Shtn1Q8K2Q9 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Shtn1Q8K2Q9 Gm6912-201ENSMUST00000117218 544 ntBASIC17.74■□□□□ 0.43
Shtn1Q8K2Q9 Gm14928-201ENSMUST00000120198 477 ntBASIC17.74■□□□□ 0.43
Shtn1Q8K2Q9 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Shtn1Q8K2Q9 Gm27920-201ENSMUST00000183953 96 ntBASIC17.74■□□□□ 0.43
Shtn1Q8K2Q9 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Shtn1Q8K2Q9 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Shtn1Q8K2Q9 Klk2-ps-201ENSMUST00000205342 571 ntBASIC17.74■□□□□ 0.43
Shtn1Q8K2Q9 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Shtn1Q8K2Q9 Gm18049-201ENSMUST00000208909 581 ntBASIC17.74■□□□□ 0.43
Shtn1Q8K2Q9 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shtn1Q8K2Q9 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shtn1Q8K2Q9 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shtn1Q8K2Q9 Gm15222-202ENSMUST00000228667 1726 ntBASIC17.74■□□□□ 0.43
Shtn1Q8K2Q9 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Shtn1Q8K2Q9 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shtn1Q8K2Q9 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shtn1Q8K2Q9 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Shtn1Q8K2Q9 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shtn1Q8K2Q9 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Shtn1Q8K2Q9 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shtn1Q8K2Q9 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shtn1Q8K2Q9 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shtn1Q8K2Q9 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shtn1Q8K2Q9 Gm42934-201ENSMUST00000196920 1345 ntBASIC17.73■□□□□ 0.43
Shtn1Q8K2Q9 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Shtn1Q8K2Q9 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shtn1Q8K2Q9 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Shtn1Q8K2Q9 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Shtn1Q8K2Q9 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.73■□□□□ 0.43
Shtn1Q8K2Q9 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shtn1Q8K2Q9 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shtn1Q8K2Q9 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Shtn1Q8K2Q9 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shtn1Q8K2Q9 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Shtn1Q8K2Q9 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Shtn1Q8K2Q9 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Shtn1Q8K2Q9 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Shtn1Q8K2Q9 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms