Protein–RNA interactions for Protein: Q61179

Irf9, Interferon regulatory factor 9, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf9Q61179 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Irf9Q61179 Gm25287-201ENSMUST00000103846 110 ntBASIC18.75■□□□□ 0.59
Irf9Q61179 Gm22918-201ENSMUST00000103855 110 ntBASIC18.75■□□□□ 0.59
Irf9Q61179 Mir449b-201ENSMUST00000104833 80 ntBASIC18.75■□□□□ 0.59
Irf9Q61179 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Irf9Q61179 Gm2810-201ENSMUST00000118681 990 ntBASIC18.75■□□□□ 0.59
Irf9Q61179 Gm11543-201ENSMUST00000120758 370 ntBASIC18.75■□□□□ 0.59
Irf9Q61179 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Irf9Q61179 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC18.75■□□□□ 0.59
Irf9Q61179 Mir6956-201ENSMUST00000183598 62 ntBASIC18.75■□□□□ 0.59
Irf9Q61179 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC18.75■□□□□ 0.59
Irf9Q61179 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Irf9Q61179 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Irf9Q61179 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC18.75■□□□□ 0.59
Irf9Q61179 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC18.75■□□□□ 0.59
Irf9Q61179 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Irf9Q61179 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Irf9Q61179 Gm11839-201ENSMUST00000120647 1953 ntBASIC18.75■□□□□ 0.59
Irf9Q61179 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Irf9Q61179 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
Irf9Q61179 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Irf9Q61179 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Irf9Q61179 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Irf9Q61179 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Irf9Q61179 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Irf9Q61179 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Irf9Q61179 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Irf9Q61179 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC18.74■□□□□ 0.59
Irf9Q61179 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Irf9Q61179 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Irf9Q61179 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC18.74■□□□□ 0.59
Irf9Q61179 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Irf9Q61179 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC18.74■□□□□ 0.59
Irf9Q61179 Auts2-212ENSMUST00000178555 309 ntBASIC18.74■□□□□ 0.59
Irf9Q61179 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Irf9Q61179 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Irf9Q61179 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Irf9Q61179 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Irf9Q61179 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Irf9Q61179 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Irf9Q61179 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Irf9Q61179 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Irf9Q61179 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Irf9Q61179 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Irf9Q61179 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Irf9Q61179 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Irf9Q61179 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Irf9Q61179 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Irf9Q61179 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Irf9Q61179 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Irf9Q61179 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC18.73■□□□□ 0.59
Irf9Q61179 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Irf9Q61179 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Irf9Q61179 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Irf9Q61179 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Irf9Q61179 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Irf9Q61179 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Irf9Q61179 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Irf9Q61179 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Irf9Q61179 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Irf9Q61179 Gm44872-201ENSMUST00000207864 420 ntBASIC18.73■□□□□ 0.59
Irf9Q61179 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC18.73■□□□□ 0.59
Irf9Q61179 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Irf9Q61179 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Irf9Q61179 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Irf9Q61179 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Irf9Q61179 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Irf9Q61179 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Irf9Q61179 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Irf9Q61179 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Irf9Q61179 Fgf17-202ENSMUST00000227123 1336 ntBASIC18.73■□□□□ 0.59
Irf9Q61179 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Irf9Q61179 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Irf9Q61179 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Irf9Q61179 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Irf9Q61179 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Irf9Q61179 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Irf9Q61179 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Irf9Q61179 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Irf9Q61179 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Irf9Q61179 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Irf9Q61179 Gm16011-201ENSMUST00000121567 2662 ntBASIC18.72■□□□□ 0.59
Irf9Q61179 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC18.72■□□□□ 0.59
Irf9Q61179 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
Irf9Q61179 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Irf9Q61179 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Irf9Q61179 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Irf9Q61179 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC18.72■□□□□ 0.59
Irf9Q61179 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC18.72■□□□□ 0.59
Irf9Q61179 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC18.72■□□□□ 0.59
Irf9Q61179 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC18.72■□□□□ 0.59
Irf9Q61179 Gm7774-201ENSMUST00000200064 533 ntBASIC18.72■□□□□ 0.59
Irf9Q61179 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Irf9Q61179 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Irf9Q61179 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Irf9Q61179 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Irf9Q61179 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Irf9Q61179 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
Irf9Q61179 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Irf9Q61179 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms