Protein–RNA interactions for Protein: Q60778

Nfkbib, NF-kappa-B inhibitor beta, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfkbibQ60778 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC18.11■□□□□ 0.49
NfkbibQ60778 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NfkbibQ60778 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NfkbibQ60778 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
NfkbibQ60778 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NfkbibQ60778 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NfkbibQ60778 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
NfkbibQ60778 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
NfkbibQ60778 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NfkbibQ60778 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NfkbibQ60778 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NfkbibQ60778 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NfkbibQ60778 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
NfkbibQ60778 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NfkbibQ60778 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NfkbibQ60778 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NfkbibQ60778 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC18.1■□□□□ 0.49
NfkbibQ60778 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
NfkbibQ60778 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC18.1■□□□□ 0.49
NfkbibQ60778 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
NfkbibQ60778 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC18.1■□□□□ 0.49
NfkbibQ60778 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NfkbibQ60778 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NfkbibQ60778 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NfkbibQ60778 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NfkbibQ60778 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
NfkbibQ60778 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NfkbibQ60778 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC18.1■□□□□ 0.49
NfkbibQ60778 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC18.1■□□□□ 0.49
NfkbibQ60778 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
NfkbibQ60778 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
NfkbibQ60778 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC18.1■□□□□ 0.49
NfkbibQ60778 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
NfkbibQ60778 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
NfkbibQ60778 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
NfkbibQ60778 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
NfkbibQ60778 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC18.1■□□□□ 0.49
NfkbibQ60778 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NfkbibQ60778 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NfkbibQ60778 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NfkbibQ60778 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NfkbibQ60778 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NfkbibQ60778 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NfkbibQ60778 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NfkbibQ60778 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NfkbibQ60778 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
NfkbibQ60778 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NfkbibQ60778 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
NfkbibQ60778 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
NfkbibQ60778 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
NfkbibQ60778 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NfkbibQ60778 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NfkbibQ60778 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NfkbibQ60778 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NfkbibQ60778 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NfkbibQ60778 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
NfkbibQ60778 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NfkbibQ60778 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NfkbibQ60778 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NfkbibQ60778 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NfkbibQ60778 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC18.09■□□□□ 0.49
NfkbibQ60778 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NfkbibQ60778 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NfkbibQ60778 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NfkbibQ60778 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NfkbibQ60778 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NfkbibQ60778 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NfkbibQ60778 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC18.09■□□□□ 0.49
NfkbibQ60778 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NfkbibQ60778 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
NfkbibQ60778 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NfkbibQ60778 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NfkbibQ60778 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC18.09■□□□□ 0.49
NfkbibQ60778 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NfkbibQ60778 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
NfkbibQ60778 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NfkbibQ60778 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
NfkbibQ60778 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
NfkbibQ60778 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
NfkbibQ60778 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
NfkbibQ60778 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
NfkbibQ60778 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NfkbibQ60778 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
NfkbibQ60778 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NfkbibQ60778 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
NfkbibQ60778 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC18.08■□□□□ 0.48
NfkbibQ60778 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
NfkbibQ60778 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NfkbibQ60778 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC18.08■□□□□ 0.48
NfkbibQ60778 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
NfkbibQ60778 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
NfkbibQ60778 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC18.08■□□□□ 0.48
NfkbibQ60778 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC18.08■□□□□ 0.48
NfkbibQ60778 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
NfkbibQ60778 AC166341.4-201ENSMUST00000220625 123 ntBASIC18.08■□□□□ 0.48
NfkbibQ60778 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NfkbibQ60778 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.48
NfkbibQ60778 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC18.08■□□□□ 0.48
NfkbibQ60778 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
NfkbibQ60778 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms