Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-2Q5R1I4 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-2Q5R1I4 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-2Q5R1I4 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-2Q5R1I4 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-2Q5R1I4 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav6-2Q5R1I4 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.24□□□□□ -0.29
Trav6-2Q5R1I4 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav6-2Q5R1I4 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav6-2Q5R1I4 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-2Q5R1I4 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-2Q5R1I4 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-2Q5R1I4 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-2Q5R1I4 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-2Q5R1I4 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-2Q5R1I4 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Trav6-2Q5R1I4 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.24□□□□□ -0.29
Trav6-2Q5R1I4 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav6-2Q5R1I4 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.24□□□□□ -0.29
Trav6-2Q5R1I4 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.24□□□□□ -0.29
Trav6-2Q5R1I4 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.24□□□□□ -0.29
Trav6-2Q5R1I4 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav6-2Q5R1I4 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-2Q5R1I4 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trav6-2Q5R1I4 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-2Q5R1I4 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-2Q5R1I4 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trav6-2Q5R1I4 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-2Q5R1I4 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-2Q5R1I4 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-2Q5R1I4 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-2Q5R1I4 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-2Q5R1I4 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-2Q5R1I4 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-2Q5R1I4 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav6-2Q5R1I4 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav6-2Q5R1I4 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav6-2Q5R1I4 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-2Q5R1I4 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-2Q5R1I4 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.23□□□□□ -0.29
Trav6-2Q5R1I4 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.23□□□□□ -0.29
Trav6-2Q5R1I4 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-2Q5R1I4 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-2Q5R1I4 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-2Q5R1I4 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-2Q5R1I4 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-2Q5R1I4 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.23□□□□□ -0.29
Trav6-2Q5R1I4 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-2Q5R1I4 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trav6-2Q5R1I4 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.23□□□□□ -0.29
Trav6-2Q5R1I4 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-2Q5R1I4 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav6-2Q5R1I4 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.23□□□□□ -0.29
Trav6-2Q5R1I4 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-2Q5R1I4 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-2Q5R1I4 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-2Q5R1I4 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-2Q5R1I4 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav6-2Q5R1I4 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-2Q5R1I4 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.23□□□□□ -0.29
Trav6-2Q5R1I4 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-2Q5R1I4 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-2Q5R1I4 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-2Q5R1I4 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-2Q5R1I4 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-2Q5R1I4 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-2Q5R1I4 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-2Q5R1I4 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-2Q5R1I4 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trav6-2Q5R1I4 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-2Q5R1I4 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav6-2Q5R1I4 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-2Q5R1I4 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-2Q5R1I4 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav6-2Q5R1I4 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-2Q5R1I4 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.22□□□□□ -0.29
Trav6-2Q5R1I4 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav6-2Q5R1I4 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-2Q5R1I4 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-2Q5R1I4 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-2Q5R1I4 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-2Q5R1I4 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-2Q5R1I4 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-2Q5R1I4 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-2Q5R1I4 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-2Q5R1I4 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav6-2Q5R1I4 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-2Q5R1I4 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-2Q5R1I4 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.22□□□□□ -0.29
Trav6-2Q5R1I4 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-2Q5R1I4 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-2Q5R1I4 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-2Q5R1I4 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-2Q5R1I4 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trav6-2Q5R1I4 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-2Q5R1I4 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6-2Q5R1I4 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trav6-2Q5R1I4 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6-2Q5R1I4 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6-2Q5R1I4 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms