Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
HSPG2P98160 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
HSPG2P98160 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
HSPG2P98160 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
HSPG2P98160 NCF1C-201ENST00000438382 1427 ntBASIC11.08□□□□□ -0.64
HSPG2P98160 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
HSPG2P98160 AC008677.1-201ENST00000519230 1561 ntBASIC11.08□□□□□ -0.64
HSPG2P98160 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC11.08□□□□□ -0.64
HSPG2P98160 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC11.08□□□□□ -0.64
HSPG2P98160 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
HSPG2P98160 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
HSPG2P98160 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
HSPG2P98160 COX5BP8-201ENST00000416911 349 ntBASIC11.08□□□□□ -0.64
HSPG2P98160 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
HSPG2P98160 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC11.08□□□□□ -0.64
HSPG2P98160 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
HSPG2P98160 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
HSPG2P98160 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
HSPG2P98160 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC11.08□□□□□ -0.64
HSPG2P98160 FEM1AP3-201ENST00000403722 1741 ntBASIC11.08□□□□□ -0.64
HSPG2P98160 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC11.08□□□□□ -0.64
HSPG2P98160 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
HSPG2P98160 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
HSPG2P98160 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC11.07□□□□□ -0.64
HSPG2P98160 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC11.07□□□□□ -0.64
HSPG2P98160 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC11.07□□□□□ -0.64
HSPG2P98160 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC11.07□□□□□ -0.64
HSPG2P98160 AC084346.2-201ENST00000607097 949 ntBASIC11.07□□□□□ -0.64
HSPG2P98160 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
HSPG2P98160 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
HSPG2P98160 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
HSPG2P98160 AC125437.2-201ENST00000625180 2167 ntBASIC11.07□□□□□ -0.64
HSPG2P98160 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
HSPG2P98160 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
HSPG2P98160 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
HSPG2P98160 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
HSPG2P98160 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC11.07□□□□□ -0.64
HSPG2P98160 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
HSPG2P98160 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
HSPG2P98160 REM2-202ENST00000536884 1331 ntTSL 2 BASIC11.07□□□□□ -0.64
HSPG2P98160 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC11.07□□□□□ -0.64
HSPG2P98160 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
HSPG2P98160 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
HSPG2P98160 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
HSPG2P98160 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC11.07□□□□□ -0.64
HSPG2P98160 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
HSPG2P98160 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC11.07□□□□□ -0.64
HSPG2P98160 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
HSPG2P98160 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC11.07□□□□□ -0.64
HSPG2P98160 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
HSPG2P98160 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC11.07□□□□□ -0.64
HSPG2P98160 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC11.07□□□□□ -0.64
HSPG2P98160 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC11.07□□□□□ -0.64
HSPG2P98160 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
HSPG2P98160 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
HSPG2P98160 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
HSPG2P98160 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
HSPG2P98160 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
HSPG2P98160 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
HSPG2P98160 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC11.07□□□□□ -0.64
HSPG2P98160 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC11.07□□□□□ -0.64
HSPG2P98160 TMPRSS11CP-201ENST00000453277 683 ntBASIC11.07□□□□□ -0.64
HSPG2P98160 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC11.07□□□□□ -0.64
HSPG2P98160 COX11-202ENST00000571584 1108 ntTSL 2 BASIC11.07□□□□□ -0.64
HSPG2P98160 AL805961.1-202ENST00000641562 540 ntBASIC11.07□□□□□ -0.64
HSPG2P98160 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
HSPG2P98160 AC132938.6-201ENST00000623828 1655 ntBASIC11.07□□□□□ -0.64
HSPG2P98160 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
HSPG2P98160 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC11.07□□□□□ -0.64
HSPG2P98160 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC11.07□□□□□ -0.64
HSPG2P98160 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
HSPG2P98160 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC11.07□□□□□ -0.64
HSPG2P98160 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC11.07□□□□□ -0.64
HSPG2P98160 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC11.07□□□□□ -0.64
HSPG2P98160 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC11.06□□□□□ -0.64
HSPG2P98160 AL049757.1-201ENST00000616842 1596 ntBASIC11.06□□□□□ -0.64
HSPG2P98160 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
HSPG2P98160 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
HSPG2P98160 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
HSPG2P98160 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
HSPG2P98160 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
HSPG2P98160 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC11.06□□□□□ -0.64
HSPG2P98160 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
HSPG2P98160 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
HSPG2P98160 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
HSPG2P98160 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
HSPG2P98160 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
HSPG2P98160 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
HSPG2P98160 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
HSPG2P98160 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
HSPG2P98160 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
HSPG2P98160 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
HSPG2P98160 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
HSPG2P98160 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC11.06□□□□□ -0.64
HSPG2P98160 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC11.06□□□□□ -0.64
HSPG2P98160 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC11.06□□□□□ -0.64
HSPG2P98160 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
HSPG2P98160 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC11.06□□□□□ -0.64
HSPG2P98160 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
HSPG2P98160 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms