Protein–RNA interactions for Protein: P97812

Ihh, Indian hedgehog protein, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IhhP97812 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
IhhP97812 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.63■□□□□ 0.09
IhhP97812 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
IhhP97812 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
IhhP97812 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
IhhP97812 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
IhhP97812 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.63■□□□□ 0.09
IhhP97812 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
IhhP97812 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
IhhP97812 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
IhhP97812 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
IhhP97812 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
IhhP97812 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
IhhP97812 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.62■□□□□ 0.09
IhhP97812 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
IhhP97812 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
IhhP97812 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
IhhP97812 Gm6973-201ENSMUST00000117080 721 ntBASIC15.62■□□□□ 0.09
IhhP97812 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.62■□□□□ 0.09
IhhP97812 Gm44335-201ENSMUST00000196879 141 ntBASIC15.62■□□□□ 0.09
IhhP97812 Gm44297-201ENSMUST00000198304 141 ntBASIC15.62■□□□□ 0.09
IhhP97812 Gm44346-201ENSMUST00000198851 141 ntBASIC15.62■□□□□ 0.09
IhhP97812 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
IhhP97812 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.62■□□□□ 0.09
IhhP97812 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.62■□□□□ 0.09
IhhP97812 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
IhhP97812 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
IhhP97812 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
IhhP97812 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
IhhP97812 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.62■□□□□ 0.09
IhhP97812 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
IhhP97812 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
IhhP97812 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
IhhP97812 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IhhP97812 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
IhhP97812 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IhhP97812 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
IhhP97812 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
IhhP97812 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
IhhP97812 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
IhhP97812 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
IhhP97812 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.61■□□□□ 0.09
IhhP97812 Mir1895-201ENSMUST00000122615 79 ntBASIC15.61■□□□□ 0.09
IhhP97812 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.61■□□□□ 0.09
IhhP97812 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.61■□□□□ 0.09
IhhP97812 Gm18889-201ENSMUST00000174284 929 ntBASIC15.61■□□□□ 0.09
IhhP97812 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
IhhP97812 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.61■□□□□ 0.09
IhhP97812 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.61■□□□□ 0.09
IhhP97812 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IhhP97812 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
IhhP97812 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
IhhP97812 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
IhhP97812 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
IhhP97812 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IhhP97812 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IhhP97812 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.61■□□□□ 0.09
IhhP97812 Efs-202ENSMUST00000227037 2540 ntBASIC15.61■□□□□ 0.09
IhhP97812 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IhhP97812 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.61■□□□□ 0.09
IhhP97812 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IhhP97812 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
IhhP97812 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
IhhP97812 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
IhhP97812 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
IhhP97812 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
IhhP97812 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
IhhP97812 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
IhhP97812 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
IhhP97812 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
IhhP97812 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
IhhP97812 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
IhhP97812 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
IhhP97812 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.6■□□□□ 0.09
IhhP97812 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
IhhP97812 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
IhhP97812 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
IhhP97812 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.6■□□□□ 0.09
IhhP97812 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
IhhP97812 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC15.6■□□□□ 0.09
IhhP97812 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
IhhP97812 Gm26308-201ENSMUST00000157768 69 ntBASIC15.6■□□□□ 0.09
IhhP97812 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.6■□□□□ 0.09
IhhP97812 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
IhhP97812 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
IhhP97812 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
IhhP97812 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
IhhP97812 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
IhhP97812 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.6■□□□□ 0.09
IhhP97812 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
IhhP97812 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
IhhP97812 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
IhhP97812 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
IhhP97812 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
IhhP97812 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
IhhP97812 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
IhhP97812 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
IhhP97812 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.59■□□□□ 0.09
IhhP97812 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
IhhP97812 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms