Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Npas1P97459 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Npas1P97459 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Npas1P97459 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC12.71□□□□□ -0.38
Npas1P97459 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Npas1P97459 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.71□□□□□ -0.38
Npas1P97459 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Npas1P97459 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Npas1P97459 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Npas1P97459 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Npas1P97459 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Npas1P97459 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Npas1P97459 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Npas1P97459 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Npas1P97459 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Npas1P97459 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Npas1P97459 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.7□□□□□ -0.38
Npas1P97459 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Npas1P97459 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Npas1P97459 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Npas1P97459 Gm13559-201ENSMUST00000120476 863 ntBASIC12.7□□□□□ -0.38
Npas1P97459 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Npas1P97459 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC12.7□□□□□ -0.38
Npas1P97459 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC12.7□□□□□ -0.38
Npas1P97459 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Npas1P97459 Gm22240-201ENSMUST00000175225 82 ntBASIC12.7□□□□□ -0.38
Npas1P97459 Gm37055-201ENSMUST00000191866 133 ntBASIC12.7□□□□□ -0.38
Npas1P97459 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Npas1P97459 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Npas1P97459 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Npas1P97459 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Npas1P97459 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Npas1P97459 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
Npas1P97459 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Npas1P97459 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.7□□□□□ -0.38
Npas1P97459 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.7□□□□□ -0.38
Npas1P97459 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Npas1P97459 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Npas1P97459 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Npas1P97459 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Npas1P97459 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Npas1P97459 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Npas1P97459 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Npas1P97459 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Npas1P97459 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Npas1P97459 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Npas1P97459 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Npas1P97459 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Npas1P97459 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.69□□□□□ -0.38
Npas1P97459 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Npas1P97459 Zkscan4-202ENSMUST00000225845 1506 ntBASIC12.69□□□□□ -0.38
Npas1P97459 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Npas1P97459 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Npas1P97459 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Npas1P97459 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Npas1P97459 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Npas1P97459 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Npas1P97459 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Npas1P97459 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.69□□□□□ -0.38
Npas1P97459 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Npas1P97459 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Npas1P97459 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Npas1P97459 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Npas1P97459 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Npas1P97459 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Npas1P97459 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Npas1P97459 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Npas1P97459 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Npas1P97459 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Npas1P97459 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Npas1P97459 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Npas1P97459 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Npas1P97459 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Npas1P97459 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Npas1P97459 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Npas1P97459 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Npas1P97459 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Npas1P97459 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Npas1P97459 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Npas1P97459 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Npas1P97459 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Npas1P97459 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Npas1P97459 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Npas1P97459 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Npas1P97459 Mir5130-201ENSMUST00000175160 84 ntBASIC12.68□□□□□ -0.38
Npas1P97459 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Npas1P97459 Gm37722-201ENSMUST00000193757 208 ntBASIC12.68□□□□□ -0.38
Npas1P97459 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Npas1P97459 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Npas1P97459 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Npas1P97459 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Npas1P97459 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Npas1P97459 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC12.68□□□□□ -0.38
Npas1P97459 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Npas1P97459 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Npas1P97459 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Npas1P97459 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Npas1P97459 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Npas1P97459 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Npas1P97459 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms