Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sssca1P56873 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sssca1P56873 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sssca1P56873 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sssca1P56873 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Sssca1P56873 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.23□□□□□ -0.45
Sssca1P56873 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sssca1P56873 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sssca1P56873 Rprl3-201ENSMUST00000157400 290 ntBASIC12.23□□□□□ -0.45
Sssca1P56873 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.23□□□□□ -0.45
Sssca1P56873 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.23□□□□□ -0.45
Sssca1P56873 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sssca1P56873 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sssca1P56873 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sssca1P56873 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sssca1P56873 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sssca1P56873 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Sssca1P56873 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sssca1P56873 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sssca1P56873 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sssca1P56873 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sssca1P56873 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sssca1P56873 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sssca1P56873 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.23□□□□□ -0.45
Sssca1P56873 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Sssca1P56873 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Sssca1P56873 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sssca1P56873 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sssca1P56873 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sssca1P56873 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sssca1P56873 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sssca1P56873 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sssca1P56873 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sssca1P56873 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sssca1P56873 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sssca1P56873 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sssca1P56873 Gm8258-201ENSMUST00000055593 1449 ntBASIC12.22□□□□□ -0.45
Sssca1P56873 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.22□□□□□ -0.45
Sssca1P56873 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Sssca1P56873 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sssca1P56873 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Sssca1P56873 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sssca1P56873 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sssca1P56873 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sssca1P56873 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sssca1P56873 Gm15794-201ENSMUST00000120182 631 ntBASIC12.22□□□□□ -0.45
Sssca1P56873 Gm25016-201ENSMUST00000158399 131 ntBASIC12.22□□□□□ -0.45
Sssca1P56873 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Sssca1P56873 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sssca1P56873 Gm17808-201ENSMUST00000200859 894 ntBASIC12.22□□□□□ -0.45
Sssca1P56873 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sssca1P56873 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.22□□□□□ -0.45
Sssca1P56873 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sssca1P56873 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sssca1P56873 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sssca1P56873 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.22□□□□□ -0.45
Sssca1P56873 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Sssca1P56873 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Sssca1P56873 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sssca1P56873 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sssca1P56873 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sssca1P56873 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sssca1P56873 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sssca1P56873 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sssca1P56873 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sssca1P56873 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sssca1P56873 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Sssca1P56873 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sssca1P56873 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Sssca1P56873 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sssca1P56873 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sssca1P56873 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sssca1P56873 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
Sssca1P56873 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sssca1P56873 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
Sssca1P56873 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sssca1P56873 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sssca1P56873 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sssca1P56873 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Sssca1P56873 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sssca1P56873 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sssca1P56873 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Sssca1P56873 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sssca1P56873 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sssca1P56873 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Sssca1P56873 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.21□□□□□ -0.45
Sssca1P56873 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sssca1P56873 Gm12134-201ENSMUST00000122109 520 ntBASIC12.21□□□□□ -0.45
Sssca1P56873 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.21□□□□□ -0.45
Sssca1P56873 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sssca1P56873 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.21□□□□□ -0.45
Sssca1P56873 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.21□□□□□ -0.45
Sssca1P56873 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.21□□□□□ -0.45
Sssca1P56873 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Sssca1P56873 Gm44454-201ENSMUST00000198541 138 ntBASIC12.21□□□□□ -0.45
Sssca1P56873 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12.21□□□□□ -0.45
Sssca1P56873 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.21□□□□□ -0.45
Sssca1P56873 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sssca1P56873 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Sssca1P56873 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms