Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Atxn1P54254 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Atxn1P54254 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Atxn1P54254 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Atxn1P54254 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Atxn1P54254 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Atxn1P54254 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.01□□□□□ -0.01
Atxn1P54254 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Atxn1P54254 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.01□□□□□ -0.01
Atxn1P54254 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Atxn1P54254 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Atxn1P54254 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Atxn1P54254 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.01□□□□□ -0.01
Atxn1P54254 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC15.01□□□□□ -0.01
Atxn1P54254 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC15.01□□□□□ -0.01
Atxn1P54254 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Atxn1P54254 Gm27989-201ENSMUST00000184721 107 ntBASIC15.01□□□□□ -0.01
Atxn1P54254 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC15.01□□□□□ -0.01
Atxn1P54254 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Atxn1P54254 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Atxn1P54254 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.01□□□□□ -0.01
Atxn1P54254 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Atxn1P54254 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Atxn1P54254 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Atxn1P54254 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Atxn1P54254 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Atxn1P54254 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Atxn1P54254 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Atxn1P54254 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Atxn1P54254 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Atxn1P54254 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.01□□□□□ -0.01
Atxn1P54254 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Atxn1P54254 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Atxn1P54254 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15□□□□□ -0.01
Atxn1P54254 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Atxn1P54254 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Atxn1P54254 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Atxn1P54254 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Atxn1P54254 App-207ENSMUST00000227737 2827 ntBASIC15□□□□□ -0.01
Atxn1P54254 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Atxn1P54254 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15□□□□□ -0.01
Atxn1P54254 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Atxn1P54254 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Atxn1P54254 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Atxn1P54254 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC15□□□□□ -0.01
Atxn1P54254 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15□□□□□ -0.01
Atxn1P54254 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Atxn1P54254 Gm27618-201ENSMUST00000183671 60 ntBASIC15□□□□□ -0.01
Atxn1P54254 Gm27306-201ENSMUST00000183970 107 ntBASIC15□□□□□ -0.01
Atxn1P54254 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC15□□□□□ -0.01
Atxn1P54254 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC15□□□□□ -0.01
Atxn1P54254 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC15□□□□□ -0.01
Atxn1P54254 Gm43433-201ENSMUST00000196573 481 ntBASIC15□□□□□ -0.01
Atxn1P54254 Gm18057-201ENSMUST00000208220 503 ntBASIC15□□□□□ -0.01
Atxn1P54254 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC15□□□□□ -0.01
Atxn1P54254 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15□□□□□ -0.01
Atxn1P54254 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Atxn1P54254 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Atxn1P54254 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Atxn1P54254 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Atxn1P54254 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Atxn1P54254 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Atxn1P54254 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Atxn1P54254 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15□□□□□ -0.01
Atxn1P54254 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Atxn1P54254 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Atxn1P54254 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Atxn1P54254 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Atxn1P54254 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Atxn1P54254 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Atxn1P54254 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Atxn1P54254 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.99□□□□□ -0.01
Atxn1P54254 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Atxn1P54254 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Atxn1P54254 Gm9385-201ENSMUST00000117563 472 ntBASIC14.99□□□□□ -0.01
Atxn1P54254 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Atxn1P54254 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Atxn1P54254 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Atxn1P54254 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Atxn1P54254 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Atxn1P54254 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Atxn1P54254 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.99□□□□□ -0.01
Atxn1P54254 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Atxn1P54254 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Atxn1P54254 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Atxn1P54254 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Atxn1P54254 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.99□□□□□ -0.01
Atxn1P54254 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Atxn1P54254 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
Atxn1P54254 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.99□□□□□ -0.01
Atxn1P54254 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.99□□□□□ -0.01
Atxn1P54254 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Atxn1P54254 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Atxn1P54254 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Atxn1P54254 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Atxn1P54254 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.98□□□□□ -0.01
Atxn1P54254 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Atxn1P54254 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Atxn1P54254 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Atxn1P54254 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms