Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp9P41245 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC12.73□□□□□ -0.37
Mmp9P41245 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp9P41245 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp9P41245 Gm4217-201ENSMUST00000182243 1002 ntBASIC12.73□□□□□ -0.37
Mmp9P41245 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp9P41245 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Mmp9P41245 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp9P41245 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp9P41245 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Mmp9P41245 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp9P41245 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp9P41245 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp9P41245 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp9P41245 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp9P41245 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp9P41245 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp9P41245 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp9P41245 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Mmp9P41245 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp9P41245 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp9P41245 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp9P41245 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Mmp9P41245 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp9P41245 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp9P41245 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.72□□□□□ -0.37
Mmp9P41245 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp9P41245 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp9P41245 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.72□□□□□ -0.37
Mmp9P41245 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp9P41245 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.72□□□□□ -0.37
Mmp9P41245 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp9P41245 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp9P41245 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.72□□□□□ -0.37
Mmp9P41245 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp9P41245 Gm6257-201ENSMUST00000163864 910 ntBASIC12.72□□□□□ -0.37
Mmp9P41245 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Mmp9P41245 Gm7370-201ENSMUST00000219471 767 ntBASIC12.72□□□□□ -0.37
Mmp9P41245 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Mmp9P41245 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp9P41245 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Mmp9P41245 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp9P41245 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp9P41245 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp9P41245 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp9P41245 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp9P41245 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp9P41245 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Mmp9P41245 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp9P41245 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp9P41245 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp9P41245 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp9P41245 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp9P41245 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp9P41245 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Mmp9P41245 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Mmp9P41245 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Mmp9P41245 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Mmp9P41245 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Mmp9P41245 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Mmp9P41245 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Mmp9P41245 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Mmp9P41245 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Mmp9P41245 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Mmp9P41245 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Mmp9P41245 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Mmp9P41245 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Mmp9P41245 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Mmp9P41245 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Mmp9P41245 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Mmp9P41245 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Mmp9P41245 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC12.71□□□□□ -0.37
Mmp9P41245 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC12.71□□□□□ -0.37
Mmp9P41245 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
Mmp9P41245 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Mmp9P41245 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Mmp9P41245 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Mmp9P41245 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Mmp9P41245 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Mmp9P41245 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Mmp9P41245 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Mmp9P41245 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Mmp9P41245 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Mmp9P41245 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Mmp9P41245 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Mmp9P41245 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Mmp9P41245 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp9P41245 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp9P41245 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp9P41245 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp9P41245 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp9P41245 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp9P41245 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp9P41245 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp9P41245 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp9P41245 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Mmp9P41245 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp9P41245 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp9P41245 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Mmp9P41245 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms