Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SPTA1P02549 AL022326.1-202ENST00000641533 845 ntBASIC16.3■□□□□ 0.2
SPTA1P02549 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPTA1P02549 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SPTA1P02549 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPTA1P02549 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.3■□□□□ 0.2
SPTA1P02549 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SPTA1P02549 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.3■□□□□ 0.2
SPTA1P02549 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPTA1P02549 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPTA1P02549 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.29■□□□□ 0.2
SPTA1P02549 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.29■□□□□ 0.2
SPTA1P02549 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.29■□□□□ 0.2
SPTA1P02549 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SPTA1P02549 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPTA1P02549 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.29■□□□□ 0.2
SPTA1P02549 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SPTA1P02549 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPTA1P02549 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.29■□□□□ 0.2
SPTA1P02549 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SPTA1P02549 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPTA1P02549 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SPTA1P02549 AC125437.2-201ENST00000625180 2167 ntBASIC16.29■□□□□ 0.2
SPTA1P02549 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPTA1P02549 FP475955.4-201ENST00000623131 1990 ntBASIC16.29■□□□□ 0.2
SPTA1P02549 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.29■□□□□ 0.2
SPTA1P02549 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.29■□□□□ 0.2
SPTA1P02549 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPTA1P02549 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SPTA1P02549 MTCL1P1-201ENST00000446207 792 ntBASIC16.29■□□□□ 0.2
SPTA1P02549 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.29■□□□□ 0.2
SPTA1P02549 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.29■□□□□ 0.2
SPTA1P02549 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SPTA1P02549 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.29■□□□□ 0.2
SPTA1P02549 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.29■□□□□ 0.2
SPTA1P02549 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPTA1P02549 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPTA1P02549 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPTA1P02549 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SPTA1P02549 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.29■□□□□ 0.2
SPTA1P02549 AL024508.2-201ENST00000607749 1894 ntBASIC16.29■□□□□ 0.2
SPTA1P02549 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPTA1P02549 HEIH-201ENST00000623091 1652 ntBASIC16.28■□□□□ 0.2
SPTA1P02549 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.28■□□□□ 0.2
SPTA1P02549 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPTA1P02549 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SPTA1P02549 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SPTA1P02549 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.28■□□□□ 0.2
SPTA1P02549 AL139400.1-201ENST00000366220 510 ntBASIC16.28■□□□□ 0.2
SPTA1P02549 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.28■□□□□ 0.2
SPTA1P02549 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.28■□□□□ 0.2
SPTA1P02549 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.28■□□□□ 0.2
SPTA1P02549 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.28■□□□□ 0.2
SPTA1P02549 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SPTA1P02549 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SPTA1P02549 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SPTA1P02549 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.28■□□□□ 0.2
SPTA1P02549 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPTA1P02549 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC16.28■□□□□ 0.2
SPTA1P02549 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPTA1P02549 PMPCAP1-201ENST00000508114 1576 ntBASIC16.28■□□□□ 0.2
SPTA1P02549 AL032819.2-201ENST00000624543 2162 ntBASIC16.28■□□□□ 0.2
SPTA1P02549 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SPTA1P02549 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.28■□□□□ 0.2
SPTA1P02549 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SPTA1P02549 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPTA1P02549 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.28■□□□□ 0.2
SPTA1P02549 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
SPTA1P02549 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPTA1P02549 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.28■□□□□ 0.2
SPTA1P02549 AC108073.2-201ENST00000464002 357 ntBASIC16.28■□□□□ 0.2
SPTA1P02549 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.28■□□□□ 0.2
SPTA1P02549 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SPTA1P02549 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.28■□□□□ 0.2
SPTA1P02549 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.28■□□□□ 0.2
SPTA1P02549 Z92544.3-201ENST00000624747 417 ntBASIC16.28■□□□□ 0.2
SPTA1P02549 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SPTA1P02549 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SPTA1P02549 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPTA1P02549 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
SPTA1P02549 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPTA1P02549 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SPTA1P02549 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SPTA1P02549 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.27■□□□□ 0.2
SPTA1P02549 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SPTA1P02549 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.27■□□□□ 0.2
SPTA1P02549 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.27■□□□□ 0.2
SPTA1P02549 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.27■□□□□ 0.2
SPTA1P02549 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.27■□□□□ 0.2
SPTA1P02549 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.27■□□□□ 0.2
SPTA1P02549 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SPTA1P02549 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SPTA1P02549 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SPTA1P02549 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
SPTA1P02549 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.27■□□□□ 0.2
SPTA1P02549 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SPTA1P02549 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
SPTA1P02549 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
SPTA1P02549 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
SPTA1P02549 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms