Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh1F7BJK1 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Pcdh1F7BJK1 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh1F7BJK1 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh1F7BJK1 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pcdh1F7BJK1 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh1F7BJK1 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh1F7BJK1 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh1F7BJK1 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.63□□□□□ -0.23
Pcdh1F7BJK1 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdh1F7BJK1 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdh1F7BJK1 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh1F7BJK1 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh1F7BJK1 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Pcdh1F7BJK1 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh1F7BJK1 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh1F7BJK1 Celf4-206ENSMUST00000224553 1729 ntBASIC13.62□□□□□ -0.23
Pcdh1F7BJK1 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pcdh1F7BJK1 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh1F7BJK1 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Pcdh1F7BJK1 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh1F7BJK1 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdh1F7BJK1 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh1F7BJK1 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh1F7BJK1 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC13.62□□□□□ -0.23
Pcdh1F7BJK1 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh1F7BJK1 Gm18622-201ENSMUST00000219361 595 ntBASIC13.62□□□□□ -0.23
Pcdh1F7BJK1 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh1F7BJK1 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh1F7BJK1 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh1F7BJK1 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh1F7BJK1 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh1F7BJK1 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh1F7BJK1 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh1F7BJK1 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh1F7BJK1 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh1F7BJK1 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh1F7BJK1 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh1F7BJK1 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh1F7BJK1 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh1F7BJK1 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh1F7BJK1 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh1F7BJK1 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh1F7BJK1 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.62□□□□□ -0.23
Pcdh1F7BJK1 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh1F7BJK1 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Pcdh1F7BJK1 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh1F7BJK1 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh1F7BJK1 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh1F7BJK1 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh1F7BJK1 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh1F7BJK1 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh1F7BJK1 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh1F7BJK1 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Pcdh1F7BJK1 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh1F7BJK1 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC13.61□□□□□ -0.23
Pcdh1F7BJK1 Gm23547-201ENSMUST00000158210 271 ntBASIC13.61□□□□□ -0.23
Pcdh1F7BJK1 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Pcdh1F7BJK1 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh1F7BJK1 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh1F7BJK1 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh1F7BJK1 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh1F7BJK1 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.61□□□□□ -0.23
Pcdh1F7BJK1 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Pcdh1F7BJK1 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh1F7BJK1 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Pcdh1F7BJK1 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Pcdh1F7BJK1 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh1F7BJK1 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh1F7BJK1 Carlr-201ENSMUST00000181515 2574 ntBASIC13.61□□□□□ -0.23
Pcdh1F7BJK1 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.61□□□□□ -0.23
Pcdh1F7BJK1 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh1F7BJK1 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh1F7BJK1 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh1F7BJK1 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh1F7BJK1 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.61□□□□□ -0.23
Pcdh1F7BJK1 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh1F7BJK1 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Pcdh1F7BJK1 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh1F7BJK1 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Pcdh1F7BJK1 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.6□□□□□ -0.23
Pcdh1F7BJK1 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh1F7BJK1 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh1F7BJK1 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.6□□□□□ -0.23
Pcdh1F7BJK1 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Pcdh1F7BJK1 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh1F7BJK1 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh1F7BJK1 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh1F7BJK1 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh1F7BJK1 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh1F7BJK1 Gm8344-201ENSMUST00000119813 856 ntBASIC13.6□□□□□ -0.23
Pcdh1F7BJK1 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13.6□□□□□ -0.23
Pcdh1F7BJK1 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh1F7BJK1 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh1F7BJK1 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.6□□□□□ -0.23
Pcdh1F7BJK1 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.6□□□□□ -0.23
Pcdh1F7BJK1 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh1F7BJK1 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh1F7BJK1 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh1F7BJK1 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms