Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm28043E0CXC2 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Gm28043E0CXC2 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm28043E0CXC2 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC15.19■□□□□ 0.02
Gm28043E0CXC2 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm28043E0CXC2 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm28043E0CXC2 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm28043E0CXC2 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm28043E0CXC2 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Gm28043E0CXC2 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm28043E0CXC2 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm28043E0CXC2 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm28043E0CXC2 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm28043E0CXC2 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm28043E0CXC2 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Gm28043E0CXC2 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.19■□□□□ 0.02
Gm28043E0CXC2 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Gm28043E0CXC2 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Gm28043E0CXC2 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.19■□□□□ 0.02
Gm28043E0CXC2 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.19■□□□□ 0.02
Gm28043E0CXC2 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.19■□□□□ 0.02
Gm28043E0CXC2 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.19■□□□□ 0.02
Gm28043E0CXC2 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm28043E0CXC2 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm28043E0CXC2 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm28043E0CXC2 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Gm28043E0CXC2 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm28043E0CXC2 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm28043E0CXC2 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm28043E0CXC2 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.18■□□□□ 0.02
Gm28043E0CXC2 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm28043E0CXC2 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Gm28043E0CXC2 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm28043E0CXC2 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm28043E0CXC2 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm28043E0CXC2 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm28043E0CXC2 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Gm28043E0CXC2 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Gm28043E0CXC2 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Gm28043E0CXC2 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Gm28043E0CXC2 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.18■□□□□ 0.02
Gm28043E0CXC2 Gm6257-201ENSMUST00000163864 910 ntBASIC15.18■□□□□ 0.02
Gm28043E0CXC2 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Gm28043E0CXC2 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.18■□□□□ 0.02
Gm28043E0CXC2 Gm27867-201ENSMUST00000184778 125 ntBASIC15.18■□□□□ 0.02
Gm28043E0CXC2 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm28043E0CXC2 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm28043E0CXC2 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Gm28043E0CXC2 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm28043E0CXC2 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm28043E0CXC2 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm28043E0CXC2 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Gm28043E0CXC2 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Gm28043E0CXC2 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Gm28043E0CXC2 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm28043E0CXC2 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm28043E0CXC2 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm28043E0CXC2 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm28043E0CXC2 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm28043E0CXC2 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm28043E0CXC2 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Gm28043E0CXC2 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm28043E0CXC2 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm28043E0CXC2 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm28043E0CXC2 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm28043E0CXC2 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm28043E0CXC2 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Gm28043E0CXC2 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm28043E0CXC2 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.17■□□□□ 0.02
Gm28043E0CXC2 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm28043E0CXC2 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm28043E0CXC2 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.17■□□□□ 0.02
Gm28043E0CXC2 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm28043E0CXC2 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm28043E0CXC2 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm28043E0CXC2 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm28043E0CXC2 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
Gm28043E0CXC2 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Gm28043E0CXC2 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Gm28043E0CXC2 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.17■□□□□ 0.02
Gm28043E0CXC2 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm28043E0CXC2 Gm10819-201ENSMUST00000099988 561 ntBASIC15.17■□□□□ 0.02
Gm28043E0CXC2 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm28043E0CXC2 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm28043E0CXC2 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm28043E0CXC2 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm28043E0CXC2 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm28043E0CXC2 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm28043E0CXC2 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm28043E0CXC2 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Gm28043E0CXC2 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Gm28043E0CXC2 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm28043E0CXC2 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm28043E0CXC2 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm28043E0CXC2 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.16■□□□□ 0.02
Gm28043E0CXC2 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm28043E0CXC2 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Gm28043E0CXC2 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm28043E0CXC2 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm28043E0CXC2 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms