Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5-4A0A075B652 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.69□□□□□ -0.38
Trav5-4A0A075B652 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trav5-4A0A075B652 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5-4A0A075B652 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.69□□□□□ -0.38
Trav5-4A0A075B652 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5-4A0A075B652 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5-4A0A075B652 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trav5-4A0A075B652 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5-4A0A075B652 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5-4A0A075B652 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5-4A0A075B652 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5-4A0A075B652 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5-4A0A075B652 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5-4A0A075B652 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5-4A0A075B652 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5-4A0A075B652 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav5-4A0A075B652 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav5-4A0A075B652 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5-4A0A075B652 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav5-4A0A075B652 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5-4A0A075B652 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5-4A0A075B652 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5-4A0A075B652 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trav5-4A0A075B652 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5-4A0A075B652 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5-4A0A075B652 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5-4A0A075B652 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5-4A0A075B652 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5-4A0A075B652 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.68□□□□□ -0.38
Trav5-4A0A075B652 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5-4A0A075B652 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5-4A0A075B652 Gm8344-201ENSMUST00000119813 856 ntBASIC12.68□□□□□ -0.38
Trav5-4A0A075B652 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav5-4A0A075B652 Gm8655-201ENSMUST00000221159 852 ntBASIC12.68□□□□□ -0.38
Trav5-4A0A075B652 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav5-4A0A075B652 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5-4A0A075B652 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5-4A0A075B652 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav5-4A0A075B652 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5-4A0A075B652 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5-4A0A075B652 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav5-4A0A075B652 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5-4A0A075B652 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5-4A0A075B652 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Trav5-4A0A075B652 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5-4A0A075B652 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5-4A0A075B652 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5-4A0A075B652 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Trav5-4A0A075B652 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav5-4A0A075B652 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav5-4A0A075B652 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5-4A0A075B652 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5-4A0A075B652 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5-4A0A075B652 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trav5-4A0A075B652 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trav5-4A0A075B652 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5-4A0A075B652 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav5-4A0A075B652 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5-4A0A075B652 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5-4A0A075B652 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5-4A0A075B652 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Trav5-4A0A075B652 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5-4A0A075B652 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5-4A0A075B652 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5-4A0A075B652 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5-4A0A075B652 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5-4A0A075B652 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5-4A0A075B652 Gm12644-201ENSMUST00000119935 606 ntBASIC12.67□□□□□ -0.38
Trav5-4A0A075B652 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav5-4A0A075B652 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC12.67□□□□□ -0.38
Trav5-4A0A075B652 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5-4A0A075B652 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5-4A0A075B652 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5-4A0A075B652 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.67□□□□□ -0.38
Trav5-4A0A075B652 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav5-4A0A075B652 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5-4A0A075B652 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5-4A0A075B652 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trav5-4A0A075B652 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5-4A0A075B652 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav5-4A0A075B652 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5-4A0A075B652 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5-4A0A075B652 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.67□□□□□ -0.38
Trav5-4A0A075B652 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5-4A0A075B652 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5-4A0A075B652 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5-4A0A075B652 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav5-4A0A075B652 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav5-4A0A075B652 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5-4A0A075B652 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5-4A0A075B652 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5-4A0A075B652 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav5-4A0A075B652 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav5-4A0A075B652 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav5-4A0A075B652 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Trav5-4A0A075B652 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trav5-4A0A075B652 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.66□□□□□ -0.38
Trav5-4A0A075B652 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.66□□□□□ -0.38
Trav5-4A0A075B652 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms