Protein–RNA interactions for Protein: A0A075B5W6

Ighv1-55, Immunoglobulin heavy variable 1-55 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-55A0A075B5W6 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ighv1-55A0A075B5W6 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ighv1-55A0A075B5W6 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ighv1-55A0A075B5W6 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ighv1-55A0A075B5W6 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Ighv1-55A0A075B5W6 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ighv1-55A0A075B5W6 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ighv1-55A0A075B5W6 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ighv1-55A0A075B5W6 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ighv1-55A0A075B5W6 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ighv1-55A0A075B5W6 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ighv1-55A0A075B5W6 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC11.94□□□□□ -0.5
Ighv1-55A0A075B5W6 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ighv1-55A0A075B5W6 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ighv1-55A0A075B5W6 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ighv1-55A0A075B5W6 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ighv1-55A0A075B5W6 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ighv1-55A0A075B5W6 Gm30437-201ENSMUST00000206086 1201 ntBASIC11.94□□□□□ -0.5
Ighv1-55A0A075B5W6 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ighv1-55A0A075B5W6 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ighv1-55A0A075B5W6 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ighv1-55A0A075B5W6 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ighv1-55A0A075B5W6 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Ighv1-55A0A075B5W6 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ighv1-55A0A075B5W6 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ighv1-55A0A075B5W6 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Ighv1-55A0A075B5W6 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ighv1-55A0A075B5W6 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ighv1-55A0A075B5W6 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Ighv1-55A0A075B5W6 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC11.94□□□□□ -0.5
Ighv1-55A0A075B5W6 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ighv1-55A0A075B5W6 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ighv1-55A0A075B5W6 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ighv1-55A0A075B5W6 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ighv1-55A0A075B5W6 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ighv1-55A0A075B5W6 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ighv1-55A0A075B5W6 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ighv1-55A0A075B5W6 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ighv1-55A0A075B5W6 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC11.94□□□□□ -0.5
Ighv1-55A0A075B5W6 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ighv1-55A0A075B5W6 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ighv1-55A0A075B5W6 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
Ighv1-55A0A075B5W6 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ighv1-55A0A075B5W6 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ighv1-55A0A075B5W6 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ighv1-55A0A075B5W6 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ighv1-55A0A075B5W6 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ighv1-55A0A075B5W6 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ighv1-55A0A075B5W6 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ighv1-55A0A075B5W6 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ighv1-55A0A075B5W6 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Ighv1-55A0A075B5W6 Gm12350-201ENSMUST00000121208 462 ntBASIC11.93□□□□□ -0.5
Ighv1-55A0A075B5W6 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC11.93□□□□□ -0.5
Ighv1-55A0A075B5W6 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ighv1-55A0A075B5W6 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ighv1-55A0A075B5W6 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC11.93□□□□□ -0.5
Ighv1-55A0A075B5W6 Gm42670-201ENSMUST00000201816 1292 ntBASIC11.93□□□□□ -0.5
Ighv1-55A0A075B5W6 Gm43935-201ENSMUST00000203569 1050 ntBASIC11.93□□□□□ -0.5
Ighv1-55A0A075B5W6 AC138767.1-201ENSMUST00000222661 415 ntBASIC11.93□□□□□ -0.5
Ighv1-55A0A075B5W6 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ighv1-55A0A075B5W6 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ighv1-55A0A075B5W6 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Ighv1-55A0A075B5W6 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Ighv1-55A0A075B5W6 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ighv1-55A0A075B5W6 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Ighv1-55A0A075B5W6 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC11.93□□□□□ -0.5
Ighv1-55A0A075B5W6 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ighv1-55A0A075B5W6 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ighv1-55A0A075B5W6 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ighv1-55A0A075B5W6 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ighv1-55A0A075B5W6 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ighv1-55A0A075B5W6 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC11.93□□□□□ -0.5
Ighv1-55A0A075B5W6 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ighv1-55A0A075B5W6 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ighv1-55A0A075B5W6 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ighv1-55A0A075B5W6 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ighv1-55A0A075B5W6 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ighv1-55A0A075B5W6 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC11.93□□□□□ -0.5
Ighv1-55A0A075B5W6 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC11.93□□□□□ -0.5
Ighv1-55A0A075B5W6 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ighv1-55A0A075B5W6 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ighv1-55A0A075B5W6 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Ighv1-55A0A075B5W6 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Ighv1-55A0A075B5W6 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ighv1-55A0A075B5W6 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ighv1-55A0A075B5W6 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ighv1-55A0A075B5W6 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ighv1-55A0A075B5W6 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ighv1-55A0A075B5W6 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ighv1-55A0A075B5W6 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ighv1-55A0A075B5W6 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ighv1-55A0A075B5W6 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC11.92□□□□□ -0.5
Ighv1-55A0A075B5W6 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ighv1-55A0A075B5W6 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ighv1-55A0A075B5W6 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Ighv1-55A0A075B5W6 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Ighv1-55A0A075B5W6 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ighv1-55A0A075B5W6 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ighv1-55A0A075B5W6 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC11.92□□□□□ -0.5
Ighv1-55A0A075B5W6 AC154527.4-201ENSMUST00000224364 1667 ntBASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms