Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdk5rap3Q99LM2 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdk5rap3Q99LM2 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdk5rap3Q99LM2 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdk5rap3Q99LM2 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdk5rap3Q99LM2 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cdk5rap3Q99LM2 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cdk5rap3Q99LM2 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cdk5rap3Q99LM2 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cdk5rap3Q99LM2 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk5rap3Q99LM2 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk5rap3Q99LM2 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk5rap3Q99LM2 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk5rap3Q99LM2 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk5rap3Q99LM2 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk5rap3Q99LM2 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk5rap3Q99LM2 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk5rap3Q99LM2 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.7■□□□□ 0.1
Cdk5rap3Q99LM2 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk5rap3Q99LM2 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.7■□□□□ 0.1
Cdk5rap3Q99LM2 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk5rap3Q99LM2 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Cdk5rap3Q99LM2 Gm12895-201ENSMUST00000122214 226 ntBASIC15.7■□□□□ 0.1
Cdk5rap3Q99LM2 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.7■□□□□ 0.1
Cdk5rap3Q99LM2 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk5rap3Q99LM2 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk5rap3Q99LM2 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk5rap3Q99LM2 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk5rap3Q99LM2 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Cdk5rap3Q99LM2 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk5rap3Q99LM2 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk5rap3Q99LM2 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk5rap3Q99LM2 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk5rap3Q99LM2 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Cdk5rap3Q99LM2 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Cdk5rap3Q99LM2 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk5rap3Q99LM2 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cdk5rap3Q99LM2 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Cdk5rap3Q99LM2 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdk5rap3Q99LM2 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdk5rap3Q99LM2 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdk5rap3Q99LM2 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.69■□□□□ 0.1
Cdk5rap3Q99LM2 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdk5rap3Q99LM2 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdk5rap3Q99LM2 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Cdk5rap3Q99LM2 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.69■□□□□ 0.1
Cdk5rap3Q99LM2 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cdk5rap3Q99LM2 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Cdk5rap3Q99LM2 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.69■□□□□ 0.1
Cdk5rap3Q99LM2 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdk5rap3Q99LM2 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdk5rap3Q99LM2 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdk5rap3Q99LM2 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.69■□□□□ 0.1
Cdk5rap3Q99LM2 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cdk5rap3Q99LM2 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdk5rap3Q99LM2 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdk5rap3Q99LM2 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cdk5rap3Q99LM2 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdk5rap3Q99LM2 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdk5rap3Q99LM2 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdk5rap3Q99LM2 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Cdk5rap3Q99LM2 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdk5rap3Q99LM2 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.68■□□□□ 0.1
Cdk5rap3Q99LM2 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdk5rap3Q99LM2 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdk5rap3Q99LM2 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdk5rap3Q99LM2 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdk5rap3Q99LM2 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Cdk5rap3Q99LM2 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cdk5rap3Q99LM2 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cdk5rap3Q99LM2 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdk5rap3Q99LM2 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Cdk5rap3Q99LM2 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Cdk5rap3Q99LM2 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.68■□□□□ 0.1
Cdk5rap3Q99LM2 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.68■□□□□ 0.1
Cdk5rap3Q99LM2 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.68■□□□□ 0.1
Cdk5rap3Q99LM2 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.68■□□□□ 0.1
Cdk5rap3Q99LM2 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.68■□□□□ 0.1
Cdk5rap3Q99LM2 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdk5rap3Q99LM2 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cdk5rap3Q99LM2 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdk5rap3Q99LM2 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdk5rap3Q99LM2 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Cdk5rap3Q99LM2 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cdk5rap3Q99LM2 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdk5rap3Q99LM2 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.68■□□□□ 0.1
Cdk5rap3Q99LM2 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Cdk5rap3Q99LM2 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.68■□□□□ 0.1
Cdk5rap3Q99LM2 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Cdk5rap3Q99LM2 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdk5rap3Q99LM2 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk5rap3Q99LM2 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk5rap3Q99LM2 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk5rap3Q99LM2 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk5rap3Q99LM2 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Cdk5rap3Q99LM2 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.67■□□□□ 0.1
Cdk5rap3Q99LM2 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk5rap3Q99LM2 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.67■□□□□ 0.1
Cdk5rap3Q99LM2 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk5rap3Q99LM2 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms