Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Atp2a1Q8R429 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Atp2a1Q8R429 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atp2a1Q8R429 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Atp2a1Q8R429 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atp2a1Q8R429 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atp2a1Q8R429 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atp2a1Q8R429 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atp2a1Q8R429 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atp2a1Q8R429 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atp2a1Q8R429 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atp2a1Q8R429 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atp2a1Q8R429 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atp2a1Q8R429 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atp2a1Q8R429 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atp2a1Q8R429 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atp2a1Q8R429 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC16.9■□□□□ 0.3
Atp2a1Q8R429 Mir6990-201ENSMUST00000183724 91 ntBASIC16.9■□□□□ 0.3
Atp2a1Q8R429 Gm44872-201ENSMUST00000207864 420 ntBASIC16.9■□□□□ 0.3
Atp2a1Q8R429 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atp2a1Q8R429 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Atp2a1Q8R429 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Atp2a1Q8R429 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
Atp2a1Q8R429 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atp2a1Q8R429 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atp2a1Q8R429 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atp2a1Q8R429 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atp2a1Q8R429 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
Atp2a1Q8R429 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Atp2a1Q8R429 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.9■□□□□ 0.3
Atp2a1Q8R429 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Atp2a1Q8R429 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Atp2a1Q8R429 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atp2a1Q8R429 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atp2a1Q8R429 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Atp2a1Q8R429 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atp2a1Q8R429 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atp2a1Q8R429 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC16.89■□□□□ 0.29
Atp2a1Q8R429 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atp2a1Q8R429 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Atp2a1Q8R429 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Atp2a1Q8R429 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atp2a1Q8R429 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.89■□□□□ 0.29
Atp2a1Q8R429 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atp2a1Q8R429 Gm18889-201ENSMUST00000174284 929 ntBASIC16.89■□□□□ 0.29
Atp2a1Q8R429 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC16.89■□□□□ 0.29
Atp2a1Q8R429 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.89■□□□□ 0.29
Atp2a1Q8R429 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC16.89■□□□□ 0.29
Atp2a1Q8R429 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atp2a1Q8R429 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atp2a1Q8R429 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
Atp2a1Q8R429 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atp2a1Q8R429 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atp2a1Q8R429 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Atp2a1Q8R429 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Atp2a1Q8R429 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atp2a1Q8R429 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Atp2a1Q8R429 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atp2a1Q8R429 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Atp2a1Q8R429 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Atp2a1Q8R429 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.88■□□□□ 0.29
Atp2a1Q8R429 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Atp2a1Q8R429 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Atp2a1Q8R429 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.88■□□□□ 0.29
Atp2a1Q8R429 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC16.88■□□□□ 0.29
Atp2a1Q8R429 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.88■□□□□ 0.29
Atp2a1Q8R429 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Atp2a1Q8R429 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Atp2a1Q8R429 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Atp2a1Q8R429 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC16.88■□□□□ 0.29
Atp2a1Q8R429 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Atp2a1Q8R429 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Atp2a1Q8R429 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Atp2a1Q8R429 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Atp2a1Q8R429 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.88■□□□□ 0.29
Atp2a1Q8R429 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Atp2a1Q8R429 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Atp2a1Q8R429 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Atp2a1Q8R429 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC16.88■□□□□ 0.29
Atp2a1Q8R429 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Atp2a1Q8R429 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Atp2a1Q8R429 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
Atp2a1Q8R429 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.88■□□□□ 0.29
Atp2a1Q8R429 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Atp2a1Q8R429 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Atp2a1Q8R429 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Atp2a1Q8R429 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Atp2a1Q8R429 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Atp2a1Q8R429 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Atp2a1Q8R429 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Atp2a1Q8R429 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Atp2a1Q8R429 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Atp2a1Q8R429 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Atp2a1Q8R429 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.87■□□□□ 0.29
Atp2a1Q8R429 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.87■□□□□ 0.29
Atp2a1Q8R429 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Atp2a1Q8R429 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Atp2a1Q8R429 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Atp2a1Q8R429 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.87■□□□□ 0.29
Atp2a1Q8R429 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms