Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ska3Q8C263 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ska3Q8C263 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ska3Q8C263 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ska3Q8C263 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.25□□□□□ -0.13
Ska3Q8C263 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ska3Q8C263 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ska3Q8C263 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ska3Q8C263 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ska3Q8C263 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.25□□□□□ -0.13
Ska3Q8C263 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.25□□□□□ -0.13
Ska3Q8C263 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ska3Q8C263 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.25□□□□□ -0.13
Ska3Q8C263 Gm44771-201ENSMUST00000206975 626 ntBASIC14.25□□□□□ -0.13
Ska3Q8C263 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.25□□□□□ -0.13
Ska3Q8C263 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.25□□□□□ -0.13
Ska3Q8C263 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.25□□□□□ -0.13
Ska3Q8C263 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ska3Q8C263 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ska3Q8C263 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ska3Q8C263 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.25□□□□□ -0.13
Ska3Q8C263 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ska3Q8C263 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Ska3Q8C263 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ska3Q8C263 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ska3Q8C263 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ska3Q8C263 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.25□□□□□ -0.13
Ska3Q8C263 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.25□□□□□ -0.13
Ska3Q8C263 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.25□□□□□ -0.13
Ska3Q8C263 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ska3Q8C263 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ska3Q8C263 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.25□□□□□ -0.13
Ska3Q8C263 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ska3Q8C263 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Ska3Q8C263 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ska3Q8C263 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ska3Q8C263 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ska3Q8C263 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ska3Q8C263 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ska3Q8C263 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Ska3Q8C263 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ska3Q8C263 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ska3Q8C263 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ska3Q8C263 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ska3Q8C263 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ska3Q8C263 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ska3Q8C263 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.24□□□□□ -0.13
Ska3Q8C263 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.24□□□□□ -0.13
Ska3Q8C263 Gm4899-201ENSMUST00000178708 719 ntBASIC14.24□□□□□ -0.13
Ska3Q8C263 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.24□□□□□ -0.13
Ska3Q8C263 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.24□□□□□ -0.13
Ska3Q8C263 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ska3Q8C263 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ska3Q8C263 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ska3Q8C263 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ska3Q8C263 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ska3Q8C263 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ska3Q8C263 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ska3Q8C263 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Ska3Q8C263 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ska3Q8C263 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.23□□□□□ -0.13
Ska3Q8C263 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ska3Q8C263 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ska3Q8C263 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.23□□□□□ -0.13
Ska3Q8C263 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ska3Q8C263 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ska3Q8C263 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ska3Q8C263 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ska3Q8C263 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ska3Q8C263 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.23□□□□□ -0.13
Ska3Q8C263 Gm10499-201ENSMUST00000174094 934 ntBASIC14.23□□□□□ -0.13
Ska3Q8C263 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.23□□□□□ -0.13
Ska3Q8C263 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ska3Q8C263 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ska3Q8C263 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ska3Q8C263 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ska3Q8C263 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ska3Q8C263 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ska3Q8C263 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ska3Q8C263 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ska3Q8C263 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ska3Q8C263 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ska3Q8C263 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ska3Q8C263 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ska3Q8C263 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ska3Q8C263 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ska3Q8C263 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ska3Q8C263 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ska3Q8C263 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.22□□□□□ -0.13
Ska3Q8C263 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ska3Q8C263 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ska3Q8C263 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Ska3Q8C263 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ska3Q8C263 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ska3Q8C263 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ska3Q8C263 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.22□□□□□ -0.13
Ska3Q8C263 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.22□□□□□ -0.13
Ska3Q8C263 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ska3Q8C263 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ska3Q8C263 Gm1401-201ENSMUST00000122048 772 ntBASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms