Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cdk5rap1Q8BTW8 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.37□□□□□ -0.11
Cdk5rap1Q8BTW8 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.37□□□□□ -0.11
Cdk5rap1Q8BTW8 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.37□□□□□ -0.11
Cdk5rap1Q8BTW8 Gm10154-201ENSMUST00000084445 354 ntBASIC14.37□□□□□ -0.11
Cdk5rap1Q8BTW8 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Cdk5rap1Q8BTW8 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk5rap1Q8BTW8 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk5rap1Q8BTW8 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Cdk5rap1Q8BTW8 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk5rap1Q8BTW8 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk5rap1Q8BTW8 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk5rap1Q8BTW8 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk5rap1Q8BTW8 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk5rap1Q8BTW8 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk5rap1Q8BTW8 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk5rap1Q8BTW8 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk5rap1Q8BTW8 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk5rap1Q8BTW8 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk5rap1Q8BTW8 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk5rap1Q8BTW8 App-207ENSMUST00000227737 2827 ntBASIC14.36□□□□□ -0.11
Cdk5rap1Q8BTW8 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk5rap1Q8BTW8 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk5rap1Q8BTW8 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.36□□□□□ -0.11
Cdk5rap1Q8BTW8 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Cdk5rap1Q8BTW8 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk5rap1Q8BTW8 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk5rap1Q8BTW8 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk5rap1Q8BTW8 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.36□□□□□ -0.11
Cdk5rap1Q8BTW8 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.36□□□□□ -0.11
Cdk5rap1Q8BTW8 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.36□□□□□ -0.11
Cdk5rap1Q8BTW8 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.36□□□□□ -0.11
Cdk5rap1Q8BTW8 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk5rap1Q8BTW8 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk5rap1Q8BTW8 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk5rap1Q8BTW8 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Cdk5rap1Q8BTW8 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk5rap1Q8BTW8 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk5rap1Q8BTW8 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.36□□□□□ -0.11
Cdk5rap1Q8BTW8 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Cdk5rap1Q8BTW8 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk5rap1Q8BTW8 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk5rap1Q8BTW8 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk5rap1Q8BTW8 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk5rap1Q8BTW8 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.35□□□□□ -0.11
Cdk5rap1Q8BTW8 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk5rap1Q8BTW8 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk5rap1Q8BTW8 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk5rap1Q8BTW8 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk5rap1Q8BTW8 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk5rap1Q8BTW8 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk5rap1Q8BTW8 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk5rap1Q8BTW8 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk5rap1Q8BTW8 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cdk5rap1Q8BTW8 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.35□□□□□ -0.11
Cdk5rap1Q8BTW8 Rpph1-201ENSMUST00000175096 319 ntBASIC14.35□□□□□ -0.11
Cdk5rap1Q8BTW8 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.35□□□□□ -0.11
Cdk5rap1Q8BTW8 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.35□□□□□ -0.11
Cdk5rap1Q8BTW8 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.35□□□□□ -0.11
Cdk5rap1Q8BTW8 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.35□□□□□ -0.11
Cdk5rap1Q8BTW8 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.35□□□□□ -0.11
Cdk5rap1Q8BTW8 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk5rap1Q8BTW8 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk5rap1Q8BTW8 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk5rap1Q8BTW8 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Cdk5rap1Q8BTW8 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Cdk5rap1Q8BTW8 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk5rap1Q8BTW8 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk5rap1Q8BTW8 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cdk5rap1Q8BTW8 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.35□□□□□ -0.11
Cdk5rap1Q8BTW8 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.35□□□□□ -0.11
Cdk5rap1Q8BTW8 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk5rap1Q8BTW8 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk5rap1Q8BTW8 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdk5rap1Q8BTW8 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdk5rap1Q8BTW8 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdk5rap1Q8BTW8 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdk5rap1Q8BTW8 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cdk5rap1Q8BTW8 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdk5rap1Q8BTW8 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdk5rap1Q8BTW8 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdk5rap1Q8BTW8 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cdk5rap1Q8BTW8 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Cdk5rap1Q8BTW8 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Cdk5rap1Q8BTW8 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cdk5rap1Q8BTW8 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cdk5rap1Q8BTW8 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdk5rap1Q8BTW8 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdk5rap1Q8BTW8 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdk5rap1Q8BTW8 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdk5rap1Q8BTW8 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdk5rap1Q8BTW8 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdk5rap1Q8BTW8 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cdk5rap1Q8BTW8 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdk5rap1Q8BTW8 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.34□□□□□ -0.11
Cdk5rap1Q8BTW8 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Cdk5rap1Q8BTW8 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdk5rap1Q8BTW8 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cdk5rap1Q8BTW8 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cdk5rap1Q8BTW8 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms