Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3bQ80YF6 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.82□□□□□ -0.36
Upk3bQ80YF6 Gm15794-201ENSMUST00000120182 631 ntBASIC12.82□□□□□ -0.36
Upk3bQ80YF6 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.82□□□□□ -0.36
Upk3bQ80YF6 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3bQ80YF6 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.82□□□□□ -0.36
Upk3bQ80YF6 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3bQ80YF6 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3bQ80YF6 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3bQ80YF6 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3bQ80YF6 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Upk3bQ80YF6 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3bQ80YF6 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Upk3bQ80YF6 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3bQ80YF6 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.82□□□□□ -0.36
Upk3bQ80YF6 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3bQ80YF6 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3bQ80YF6 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3bQ80YF6 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3bQ80YF6 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3bQ80YF6 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Upk3bQ80YF6 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Upk3bQ80YF6 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk3bQ80YF6 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk3bQ80YF6 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.81□□□□□ -0.36
Upk3bQ80YF6 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk3bQ80YF6 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk3bQ80YF6 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk3bQ80YF6 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.81□□□□□ -0.36
Upk3bQ80YF6 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk3bQ80YF6 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.81□□□□□ -0.36
Upk3bQ80YF6 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk3bQ80YF6 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Upk3bQ80YF6 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk3bQ80YF6 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Upk3bQ80YF6 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Upk3bQ80YF6 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Upk3bQ80YF6 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC12.81□□□□□ -0.36
Upk3bQ80YF6 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.81□□□□□ -0.36
Upk3bQ80YF6 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.81□□□□□ -0.36
Upk3bQ80YF6 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk3bQ80YF6 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk3bQ80YF6 Gm25016-201ENSMUST00000158399 131 ntBASIC12.81□□□□□ -0.36
Upk3bQ80YF6 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Upk3bQ80YF6 Gm17808-201ENSMUST00000200859 894 ntBASIC12.81□□□□□ -0.36
Upk3bQ80YF6 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.81□□□□□ -0.36
Upk3bQ80YF6 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk3bQ80YF6 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Upk3bQ80YF6 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk3bQ80YF6 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.81□□□□□ -0.36
Upk3bQ80YF6 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk3bQ80YF6 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Upk3bQ80YF6 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.81□□□□□ -0.36
Upk3bQ80YF6 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk3bQ80YF6 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Upk3bQ80YF6 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Upk3bQ80YF6 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Upk3bQ80YF6 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Upk3bQ80YF6 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk3bQ80YF6 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk3bQ80YF6 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk3bQ80YF6 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk3bQ80YF6 Gm8258-201ENSMUST00000055593 1449 ntBASIC12.8□□□□□ -0.36
Upk3bQ80YF6 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Upk3bQ80YF6 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Upk3bQ80YF6 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk3bQ80YF6 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk3bQ80YF6 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk3bQ80YF6 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk3bQ80YF6 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.8□□□□□ -0.36
Upk3bQ80YF6 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk3bQ80YF6 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk3bQ80YF6 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Upk3bQ80YF6 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk3bQ80YF6 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.8□□□□□ -0.36
Upk3bQ80YF6 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Upk3bQ80YF6 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk3bQ80YF6 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Upk3bQ80YF6 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk3bQ80YF6 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk3bQ80YF6 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.8□□□□□ -0.36
Upk3bQ80YF6 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Upk3bQ80YF6 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.8□□□□□ -0.36
Upk3bQ80YF6 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk3bQ80YF6 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk3bQ80YF6 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Upk3bQ80YF6 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk3bQ80YF6 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk3bQ80YF6 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk3bQ80YF6 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Upk3bQ80YF6 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk3bQ80YF6 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Upk3bQ80YF6 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Upk3bQ80YF6 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk3bQ80YF6 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk3bQ80YF6 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Upk3bQ80YF6 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk3bQ80YF6 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Upk3bQ80YF6 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk3bQ80YF6 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms