Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Six4Q61321 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Six4Q61321 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Six4Q61321 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Six4Q61321 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Six4Q61321 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Six4Q61321 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Six4Q61321 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Six4Q61321 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.26■□□□□ 0.03
Six4Q61321 Sybu-209ENSMUST00000228639 4113 ntBASIC15.26■□□□□ 0.03
Six4Q61321 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Six4Q61321 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Six4Q61321 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Six4Q61321 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Six4Q61321 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Six4Q61321 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Six4Q61321 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Six4Q61321 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Six4Q61321 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Six4Q61321 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.26■□□□□ 0.03
Six4Q61321 Gm5177-201ENSMUST00000183092 997 ntBASIC15.26■□□□□ 0.03
Six4Q61321 Gm43767-201ENSMUST00000198933 381 ntBASIC15.26■□□□□ 0.03
Six4Q61321 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Six4Q61321 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Six4Q61321 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Six4Q61321 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Six4Q61321 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Six4Q61321 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Six4Q61321 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.26■□□□□ 0.03
Six4Q61321 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Six4Q61321 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Six4Q61321 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Six4Q61321 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Six4Q61321 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Six4Q61321 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Six4Q61321 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Six4Q61321 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Six4Q61321 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Six4Q61321 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Six4Q61321 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.25■□□□□ 0.03
Six4Q61321 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Six4Q61321 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Six4Q61321 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Six4Q61321 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Six4Q61321 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Six4Q61321 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Six4Q61321 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Six4Q61321 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Six4Q61321 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.25■□□□□ 0.03
Six4Q61321 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.25■□□□□ 0.03
Six4Q61321 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.25■□□□□ 0.03
Six4Q61321 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.25■□□□□ 0.03
Six4Q61321 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Six4Q61321 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.25■□□□□ 0.03
Six4Q61321 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Six4Q61321 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Six4Q61321 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Six4Q61321 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Six4Q61321 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Six4Q61321 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Six4Q61321 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Six4Q61321 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.25■□□□□ 0.03
Six4Q61321 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Six4Q61321 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Six4Q61321 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Six4Q61321 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Six4Q61321 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Six4Q61321 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Six4Q61321 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Six4Q61321 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Six4Q61321 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Six4Q61321 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Six4Q61321 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Six4Q61321 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Six4Q61321 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.24■□□□□ 0.03
Six4Q61321 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Six4Q61321 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Six4Q61321 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Six4Q61321 Gm43514-201ENSMUST00000198852 424 ntBASIC15.24■□□□□ 0.03
Six4Q61321 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC15.24■□□□□ 0.03
Six4Q61321 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Six4Q61321 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.24■□□□□ 0.03
Six4Q61321 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.24■□□□□ 0.03
Six4Q61321 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Six4Q61321 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Six4Q61321 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Six4Q61321 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Six4Q61321 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Six4Q61321 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.24■□□□□ 0.03
Six4Q61321 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Six4Q61321 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Six4Q61321 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.24■□□□□ 0.03
Six4Q61321 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Six4Q61321 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.23■□□□□ 0.03
Six4Q61321 Efs-202ENSMUST00000227037 2540 ntBASIC15.23■□□□□ 0.03
Six4Q61321 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.23■□□□□ 0.03
Six4Q61321 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Six4Q61321 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Six4Q61321 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Six4Q61321 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms