Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav8d-1Q5R1H8 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.46□□□□□ -0.42
Trav8d-1Q5R1H8 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Trav8d-1Q5R1H8 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav8d-1Q5R1H8 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Trav8d-1Q5R1H8 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav8d-1Q5R1H8 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav8d-1Q5R1H8 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav8d-1Q5R1H8 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav8d-1Q5R1H8 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav8d-1Q5R1H8 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Trav8d-1Q5R1H8 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Trav8d-1Q5R1H8 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav8d-1Q5R1H8 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8d-1Q5R1H8 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav8d-1Q5R1H8 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav8d-1Q5R1H8 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8d-1Q5R1H8 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8d-1Q5R1H8 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8d-1Q5R1H8 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8d-1Q5R1H8 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8d-1Q5R1H8 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8d-1Q5R1H8 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8d-1Q5R1H8 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8d-1Q5R1H8 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav8d-1Q5R1H8 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8d-1Q5R1H8 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8d-1Q5R1H8 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8d-1Q5R1H8 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8d-1Q5R1H8 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8d-1Q5R1H8 Gm7284-201ENSMUST00000131667 944 ntBASIC12.45□□□□□ -0.42
Trav8d-1Q5R1H8 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav8d-1Q5R1H8 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.45□□□□□ -0.42
Trav8d-1Q5R1H8 Gm21362-201ENSMUST00000194272 928 ntBASIC12.45□□□□□ -0.42
Trav8d-1Q5R1H8 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8d-1Q5R1H8 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8d-1Q5R1H8 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8d-1Q5R1H8 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8d-1Q5R1H8 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8d-1Q5R1H8 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8d-1Q5R1H8 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Trav8d-1Q5R1H8 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav8d-1Q5R1H8 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8d-1Q5R1H8 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8d-1Q5R1H8 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav8d-1Q5R1H8 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8d-1Q5R1H8 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8d-1Q5R1H8 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8d-1Q5R1H8 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8d-1Q5R1H8 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav8d-1Q5R1H8 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8d-1Q5R1H8 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8d-1Q5R1H8 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Trav8d-1Q5R1H8 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav8d-1Q5R1H8 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trav8d-1Q5R1H8 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav8d-1Q5R1H8 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trav8d-1Q5R1H8 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav8d-1Q5R1H8 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav8d-1Q5R1H8 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav8d-1Q5R1H8 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav8d-1Q5R1H8 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav8d-1Q5R1H8 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav8d-1Q5R1H8 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav8d-1Q5R1H8 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav8d-1Q5R1H8 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav8d-1Q5R1H8 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav8d-1Q5R1H8 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav8d-1Q5R1H8 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Trav8d-1Q5R1H8 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav8d-1Q5R1H8 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Trav8d-1Q5R1H8 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav8d-1Q5R1H8 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav8d-1Q5R1H8 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav8d-1Q5R1H8 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav8d-1Q5R1H8 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Trav8d-1Q5R1H8 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav8d-1Q5R1H8 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav8d-1Q5R1H8 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav8d-1Q5R1H8 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav8d-1Q5R1H8 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.44□□□□□ -0.42
Trav8d-1Q5R1H8 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav8d-1Q5R1H8 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav8d-1Q5R1H8 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Trav8d-1Q5R1H8 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trav8d-1Q5R1H8 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav8d-1Q5R1H8 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav8d-1Q5R1H8 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav8d-1Q5R1H8 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav8d-1Q5R1H8 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Trav8d-1Q5R1H8 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav8d-1Q5R1H8 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.43□□□□□ -0.42
Trav8d-1Q5R1H8 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav8d-1Q5R1H8 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trav8d-1Q5R1H8 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav8d-1Q5R1H8 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav8d-1Q5R1H8 Gm12134-201ENSMUST00000122109 520 ntBASIC12.43□□□□□ -0.42
Trav8d-1Q5R1H8 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav8d-1Q5R1H8 Gm27704-201ENSMUST00000185094 107 ntBASIC12.43□□□□□ -0.42
Trav8d-1Q5R1H8 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms