Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.52□□□□□ -0.4
Trim63Q38HM4 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trim63Q38HM4 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.52□□□□□ -0.4
Trim63Q38HM4 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trim63Q38HM4 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim63Q38HM4 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim63Q38HM4 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim63Q38HM4 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim63Q38HM4 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim63Q38HM4 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim63Q38HM4 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim63Q38HM4 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Trim63Q38HM4 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC12.52□□□□□ -0.41
Trim63Q38HM4 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC12.52□□□□□ -0.41
Trim63Q38HM4 Mir7075-201ENSMUST00000184187 82 ntBASIC12.52□□□□□ -0.41
Trim63Q38HM4 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trim63Q38HM4 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trim63Q38HM4 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim63Q38HM4 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.52□□□□□ -0.41
Trim63Q38HM4 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim63Q38HM4 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim63Q38HM4 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim63Q38HM4 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trim63Q38HM4 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim63Q38HM4 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Trim63Q38HM4 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim63Q38HM4 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.52□□□□□ -0.41
Trim63Q38HM4 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim63Q38HM4 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim63Q38HM4 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim63Q38HM4 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim63Q38HM4 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trim63Q38HM4 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim63Q38HM4 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trim63Q38HM4 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim63Q38HM4 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim63Q38HM4 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim63Q38HM4 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim63Q38HM4 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trim63Q38HM4 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trim63Q38HM4 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim63Q38HM4 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim63Q38HM4 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim63Q38HM4 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.51□□□□□ -0.41
Trim63Q38HM4 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim63Q38HM4 Gm6576-201ENSMUST00000169678 883 ntBASIC12.51□□□□□ -0.41
Trim63Q38HM4 Gm43173-201ENSMUST00000202246 593 ntBASIC12.51□□□□□ -0.41
Trim63Q38HM4 AC140930.3-201ENSMUST00000222935 274 ntBASIC12.51□□□□□ -0.41
Trim63Q38HM4 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim63Q38HM4 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim63Q38HM4 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim63Q38HM4 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Trim63Q38HM4 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim63Q38HM4 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim63Q38HM4 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.51□□□□□ -0.41
Trim63Q38HM4 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.51□□□□□ -0.41
Trim63Q38HM4 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim63Q38HM4 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim63Q38HM4 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim63Q38HM4 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim63Q38HM4 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim63Q38HM4 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim63Q38HM4 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim63Q38HM4 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim63Q38HM4 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trim63Q38HM4 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim63Q38HM4 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim63Q38HM4 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim63Q38HM4 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim63Q38HM4 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim63Q38HM4 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim63Q38HM4 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim63Q38HM4 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim63Q38HM4 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC12.5□□□□□ -0.41
Trim63Q38HM4 Gm8493-201ENSMUST00000196881 489 ntBASIC12.5□□□□□ -0.41
Trim63Q38HM4 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trim63Q38HM4 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim63Q38HM4 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim63Q38HM4 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trim63Q38HM4 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim63Q38HM4 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim63Q38HM4 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim63Q38HM4 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim63Q38HM4 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC12.5□□□□□ -0.41
Trim63Q38HM4 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim63Q38HM4 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim63Q38HM4 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim63Q38HM4 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim63Q38HM4 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Trim63Q38HM4 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim63Q38HM4 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trim63Q38HM4 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim63Q38HM4 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim63Q38HM4 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trim63Q38HM4 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim63Q38HM4 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.5□□□□□ -0.41
Trim63Q38HM4 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trim63Q38HM4 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trim63Q38HM4 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Trim63Q38HM4 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms