Protein–RNA interactions for Protein: Q0P678

Zc3h18, Zinc finger CCCH domain-containing protein 18, mousemouse

Known RBP Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h18Q0P678 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Zc3h18Q0P678 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Zc3h18Q0P678 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Zc3h18Q0P678 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.48■□□□□ 0.23
Zc3h18Q0P678 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.48■□□□□ 0.23
Zc3h18Q0P678 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.48■□□□□ 0.23
Zc3h18Q0P678 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Zc3h18Q0P678 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Zc3h18Q0P678 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Zc3h18Q0P678 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Zc3h18Q0P678 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Zc3h18Q0P678 Gm16425-201ENSMUST00000118143 3130 ntBASIC16.48■□□□□ 0.23
Zc3h18Q0P678 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Zc3h18Q0P678 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Zc3h18Q0P678 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.48■□□□□ 0.23
Zc3h18Q0P678 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Zc3h18Q0P678 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Zc3h18Q0P678 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Zc3h18Q0P678 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Zc3h18Q0P678 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Zc3h18Q0P678 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Zc3h18Q0P678 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Zc3h18Q0P678 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zc3h18Q0P678 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zc3h18Q0P678 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.47■□□□□ 0.23
Zc3h18Q0P678 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zc3h18Q0P678 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Zc3h18Q0P678 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zc3h18Q0P678 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zc3h18Q0P678 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zc3h18Q0P678 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Zc3h18Q0P678 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.47■□□□□ 0.23
Zc3h18Q0P678 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.47■□□□□ 0.23
Zc3h18Q0P678 Mir5131-201ENSMUST00000175426 93 ntBASIC16.47■□□□□ 0.23
Zc3h18Q0P678 Gm4899-201ENSMUST00000178708 719 ntBASIC16.47■□□□□ 0.23
Zc3h18Q0P678 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.47■□□□□ 0.23
Zc3h18Q0P678 Gm7787-201ENSMUST00000216858 688 ntBASIC16.47■□□□□ 0.23
Zc3h18Q0P678 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Zc3h18Q0P678 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.47■□□□□ 0.23
Zc3h18Q0P678 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Zc3h18Q0P678 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zc3h18Q0P678 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zc3h18Q0P678 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.47■□□□□ 0.23
Zc3h18Q0P678 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zc3h18Q0P678 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Zc3h18Q0P678 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Zc3h18Q0P678 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Zc3h18Q0P678 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Zc3h18Q0P678 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Zc3h18Q0P678 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Zc3h18Q0P678 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Zc3h18Q0P678 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Zc3h18Q0P678 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Zc3h18Q0P678 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Zc3h18Q0P678 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Zc3h18Q0P678 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC16.46■□□□□ 0.23
Zc3h18Q0P678 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Zc3h18Q0P678 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Zc3h18Q0P678 Gm13036-201ENSMUST00000117799 748 ntBASIC16.46■□□□□ 0.23
Zc3h18Q0P678 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Zc3h18Q0P678 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Zc3h18Q0P678 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Zc3h18Q0P678 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.23
Zc3h18Q0P678 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.23
Zc3h18Q0P678 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Zc3h18Q0P678 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Zc3h18Q0P678 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Zc3h18Q0P678 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Zc3h18Q0P678 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.46■□□□□ 0.23
Zc3h18Q0P678 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Zc3h18Q0P678 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
Zc3h18Q0P678 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Zc3h18Q0P678 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Zc3h18Q0P678 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Zc3h18Q0P678 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Zc3h18Q0P678 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Zc3h18Q0P678 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.45■□□□□ 0.22
Zc3h18Q0P678 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Zc3h18Q0P678 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Zc3h18Q0P678 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Zc3h18Q0P678 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Zc3h18Q0P678 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Zc3h18Q0P678 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Zc3h18Q0P678 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Zc3h18Q0P678 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Zc3h18Q0P678 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Zc3h18Q0P678 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.45■□□□□ 0.22
Zc3h18Q0P678 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Zc3h18Q0P678 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Zc3h18Q0P678 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.45■□□□□ 0.22
Zc3h18Q0P678 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Zc3h18Q0P678 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Zc3h18Q0P678 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Zc3h18Q0P678 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.45■□□□□ 0.22
Zc3h18Q0P678 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Zc3h18Q0P678 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Zc3h18Q0P678 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.45■□□□□ 0.22
Zc3h18Q0P678 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.45■□□□□ 0.22
Zc3h18Q0P678 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.45■□□□□ 0.22
Zc3h18Q0P678 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms