Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.88□□□□□ -0.19
Scn1bP97952 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scn1bP97952 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Scn1bP97952 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC13.88□□□□□ -0.19
Scn1bP97952 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn1bP97952 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn1bP97952 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Scn1bP97952 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scn1bP97952 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Scn1bP97952 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Scn1bP97952 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
Scn1bP97952 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn1bP97952 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn1bP97952 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn1bP97952 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn1bP97952 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn1bP97952 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn1bP97952 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn1bP97952 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn1bP97952 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn1bP97952 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn1bP97952 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn1bP97952 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn1bP97952 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn1bP97952 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Scn1bP97952 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Scn1bP97952 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC13.87□□□□□ -0.19
Scn1bP97952 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC13.87□□□□□ -0.19
Scn1bP97952 Gm7213-201ENSMUST00000215977 950 ntBASIC13.87□□□□□ -0.19
Scn1bP97952 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn1bP97952 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn1bP97952 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn1bP97952 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn1bP97952 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn1bP97952 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Scn1bP97952 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Scn1bP97952 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Scn1bP97952 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Scn1bP97952 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn1bP97952 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Scn1bP97952 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Scn1bP97952 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Scn1bP97952 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Scn1bP97952 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Scn1bP97952 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn1bP97952 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Scn1bP97952 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn1bP97952 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Scn1bP97952 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn1bP97952 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.86□□□□□ -0.19
Scn1bP97952 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn1bP97952 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn1bP97952 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn1bP97952 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Scn1bP97952 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn1bP97952 Gm16061-201ENSMUST00000122167 857 ntBASIC13.86□□□□□ -0.19
Scn1bP97952 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn1bP97952 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn1bP97952 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn1bP97952 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn1bP97952 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn1bP97952 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn1bP97952 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Scn1bP97952 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn1bP97952 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn1bP97952 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Scn1bP97952 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn1bP97952 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn1bP97952 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn1bP97952 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn1bP97952 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn1bP97952 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn1bP97952 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.85□□□□□ -0.19
Scn1bP97952 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.85□□□□□ -0.19
Scn1bP97952 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scn1bP97952 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn1bP97952 AC132265.1-201ENSMUST00000219233 1665 ntBASIC13.85□□□□□ -0.19
Scn1bP97952 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Scn1bP97952 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.85□□□□□ -0.19
Scn1bP97952 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Scn1bP97952 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Scn1bP97952 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Scn1bP97952 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC13.85□□□□□ -0.19
Scn1bP97952 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC13.85□□□□□ -0.19
Scn1bP97952 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn1bP97952 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.85□□□□□ -0.19
Scn1bP97952 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Scn1bP97952 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.85□□□□□ -0.19
Scn1bP97952 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn1bP97952 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn1bP97952 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn1bP97952 Gm6858-201ENSMUST00000208582 1468 ntBASIC13.85□□□□□ -0.19
Scn1bP97952 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn1bP97952 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn1bP97952 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.85□□□□□ -0.19
Scn1bP97952 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.85□□□□□ -0.19
Scn1bP97952 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn1bP97952 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.85□□□□□ -0.19
Scn1bP97952 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn1bP97952 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms