Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
PAX9P55771 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PAX9P55771 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC14.51□□□□□ -0.09
PAX9P55771 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PAX9P55771 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
PAX9P55771 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PAX9P55771 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PAX9P55771 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC14.51□□□□□ -0.09
PAX9P55771 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PAX9P55771 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PAX9P55771 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PAX9P55771 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PAX9P55771 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PAX9P55771 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PAX9P55771 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PAX9P55771 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PAX9P55771 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PAX9P55771 LINC00304-203ENST00000565008 1864 ntBASIC14.5□□□□□ -0.09
PAX9P55771 KRT16P1-201ENST00000399124 1418 ntBASIC14.5□□□□□ -0.09
PAX9P55771 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC14.5□□□□□ -0.09
PAX9P55771 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PAX9P55771 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PAX9P55771 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PAX9P55771 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PAX9P55771 AGGF1P2-201ENST00000426656 2106 ntBASIC14.5□□□□□ -0.09
PAX9P55771 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PAX9P55771 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
PAX9P55771 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
PAX9P55771 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PAX9P55771 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
PAX9P55771 KIRREL3-AS3-201ENST00000404882 831 ntBASIC14.5□□□□□ -0.09
PAX9P55771 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC14.5□□□□□ -0.09
PAX9P55771 AC133681.1-201ENST00000465482 601 ntBASIC14.5□□□□□ -0.09
PAX9P55771 AP003097.1-201ENST00000530657 1135 ntBASIC14.5□□□□□ -0.09
PAX9P55771 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PAX9P55771 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
PAX9P55771 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC14.5□□□□□ -0.09
PAX9P55771 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC14.5□□□□□ -0.09
PAX9P55771 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC14.5□□□□□ -0.09
PAX9P55771 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PAX9P55771 AC124016.1-201ENST00000609552 612 ntBASIC14.5□□□□□ -0.09
PAX9P55771 AL031985.4-201ENST00000642138 673 ntBASIC14.5□□□□□ -0.09
PAX9P55771 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PAX9P55771 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PAX9P55771 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC14.5□□□□□ -0.09
PAX9P55771 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PAX9P55771 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PAX9P55771 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
PAX9P55771 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PAX9P55771 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
PAX9P55771 AC106886.4-201ENST00000623557 2502 ntBASIC14.5□□□□□ -0.09
PAX9P55771 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PAX9P55771 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PAX9P55771 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
PAX9P55771 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PAX9P55771 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC14.49□□□□□ -0.09
PAX9P55771 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PAX9P55771 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
PAX9P55771 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PAX9P55771 AL024508.2-201ENST00000607749 1894 ntBASIC14.49□□□□□ -0.09
PAX9P55771 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PAX9P55771 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PAX9P55771 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PAX9P55771 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
PAX9P55771 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC14.49□□□□□ -0.09
PAX9P55771 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PAX9P55771 RNA5SP413-201ENST00000516373 109 ntBASIC14.49□□□□□ -0.09
PAX9P55771 MIR3180-5-201ENST00000583743 153 ntBASIC14.49□□□□□ -0.09
PAX9P55771 AC110285.5-201ENST00000611501 352 ntBASIC14.49□□□□□ -0.09
PAX9P55771 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.49□□□□□ -0.09
PAX9P55771 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.49□□□□□ -0.09
PAX9P55771 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
PAX9P55771 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.49□□□□□ -0.09
PAX9P55771 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PAX9P55771 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC14.49□□□□□ -0.09
PAX9P55771 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC14.49□□□□□ -0.09
PAX9P55771 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
PAX9P55771 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PAX9P55771 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PAX9P55771 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PAX9P55771 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
PAX9P55771 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
PAX9P55771 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PAX9P55771 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PAX9P55771 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PAX9P55771 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.48□□□□□ -0.09
PAX9P55771 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PAX9P55771 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PAX9P55771 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.48□□□□□ -0.09
PAX9P55771 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PAX9P55771 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PAX9P55771 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
PAX9P55771 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PAX9P55771 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PAX9P55771 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PAX9P55771 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PAX9P55771 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
PAX9P55771 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
PAX9P55771 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
PAX9P55771 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms